Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01293 ATGTTCTCACTCTCACCGGTTCGCCCCACCTTCCCTCCGGTTCGCTGCAGCACCCGTTCGCTGCGCCAGCGAATCCAAACCGTCCATACCATTCAAAAGATCACCGAAGCCATGAAACTTGTCGCCGCCGCCCGCATCCGCCGCGCCCAGGAGGCCGTCGTCAACAGCCGCCCCTTCTCCTCCAACCTCGCCGCAATGCTCAACGACATCACCCTGCGCCTCCATAACGACCACGTTTCCACCCCTCTCACGCGCGCCACAACCCCCTTCAGAACCGTCGCTCTCGTCATCGTCACCGGCGACCGCGGCCTCTGCGGCGGCTTCAACAAATCGGTGATAAAAAAAGCCGCCACCCGAATTGAGGAGCTGAGGAAACTTAATTTGGGGTGCGTCGTGATCAGCGTTGGGAAAAAGGGTAACTCCTTTTTCACTCTCGGCAACAGAAACCAAGACCCTTTTGTTAAAGTTGACAGCTTTATCGAAATTGGGGGCTTTCCCACCGCGAAGGAGGCTCAGGTTATTGCTGATGATGTTTTCTCGTTGTTTGTTAGCGAGGAGGTTGATAAAGTTGAGCTTGTGTATACTAAATTTGTTTCATTGGTTAGGTTTGAGCCTGTGATTCAGACTTTGTTGCCTTTGGGGGAGGTTTCTGATGTGAAAGATGAGATTTTTCGGTTGAGTAGTAAAGAGGGGAAGTTGGTTGTGGAGAGGGATGTGATGAGGTTGAGGAAAGAGGGTGAAGTGCTTTCTCCTCTAATGGAGTTTGAGCAGGACCCTGTTATGATTCTTGATGCAATGTTGCCTCTTTATTTGAATAGTCAGGTTTTGAGGGGGTTGCAGGAGTCTGTGGCTAGTGAGCTTGCTGCTAGGATGGGGGCAATGGCAACGGCCACTGATAACGCGGTTGAGTTGAAGAAGAGGCTTTCGGTTCAGTACAATCGGGAGCGCCAGGCAAAGATCACTGGGGAGTTGTTGGAGATTGTGGCTGGAGCTGAGGCACTAACAAAAATTGACTAA 1017 0.5182 MFSLSPVRPTFPPVRCSTRSLRQRIQTVHTIQKITEAMKLVAAARIRRAQEAVVNSRPFSSNLAAMLNDITLRLHNDHVSTPLTRATTPFRTVALVIVTGDRGLCGGFNKSVIKKAATRIEELRKLNLGCVVISVGKKGNSFFTLGNRNQDPFVKVDSFIEIGGFPTAKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVRFEPVIQTLLPLGEVSDVKDEIFRLSSKEGKLVVERDVMRLRKEGEVLSPLMEFEQDPVMILDAMLPLYLNSQVLRGLQESVASELAARMGAMATATDNAVELKKRLSVQYNRERQAKITGELLEIVAGAEALTKID 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01293 338 Gene3D ATP synthase, gamma subunit, helix hairpin domain 16 89 - -
Pste7g01293 338 Gene3D ATP synthase, gamma subunit, helix hairpin domain 234 334 - -
Pste7g01293 338 ProSitePatterns ATP synthase gamma subunit signature. 320 333 IPR023632 -
Pste7g01293 338 Hamap ATP synthase gamma chain [atpG]. 15 334 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 17 334 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 PANTHER ATP SYNTHASE GAMMA CHAIN 17 334 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 Pfam ATP synthase 18 334 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 FunFam ATP synthase gamma chain 82 214 - -
Pste7g01293 338 PRINTS ATP synthase gamma subunit signature 188 205 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 PRINTS ATP synthase gamma subunit signature 281 300 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 PRINTS ATP synthase gamma subunit signature 90 109 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 PRINTS ATP synthase gamma subunit signature 312 333 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 Gene3D - 90 227 - -
Pste7g01293 338 CDD F1-ATPase_gamma 17 331 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 NCBIfam ATP synthase F1 subunit gamma 17 334 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pste7g01293 338 FunFam ATP synthase gamma chain, chloroplastic 229 334 - -
Pste7g01293 338 FunFam ATP synthase gamma chain, chloroplastic 16 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01293 Pste-Chr7 11718385 11719401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01293 14 334 Primary Pumps ATPases AT1G15700 63.363 2.36e-137 393