Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01285 AAGTGACAAGTTGAATAATCAAATGTGCAAGAAGCCCCAAAACAGAAAGCAGTGTGTGATTGATAAGCTGCAATCTACTTTTCACCAATGGAAAAGCAATTCCGATGTTGCAGAGCAAGGACGTCTTGTGAAGGAGGTTCTTGCTGGATGTGAAAGCATAGAGTGGCAGGTGGATGAATTGGATAAAGCAATTGCTGTGGCATCTAGAGATCCTTCTTGGTATGGAATTGATGAAGTTGAGATTGAAAACCGAAGGAAATGGACAAGCAGTGCTCTGGAAGCTGGAAAGGGCTCAAGTAACACAAGTCACGCTAGTGTAAATGGGATGCGCCAAGAGCTAATGAGGCTACCAAATTCTCATCAAACTGATACCTCCAACCTGTATGCTGCCCGAGATAGTGATGATTTCATACAATCAGAATCCGATCGACAAATGCTTCTTATAAAGGAACAGGATGAGGAGTTGGACGAGCTCAGTGAAAGTGTGCGAAGAATTGGAGGTGTGGGACTTACAATACATGATGAACTCACTGCACAGGAAAAGATTCTAGATGAACTTGGTTCTGAGATGGACAGTACAACAAATCGTCTTGATTTTGTCCAAAAAAAAGTGGCAATGGTGATGAAGAAGGCGAGTGCAAAGGGCCAAATCATGATGATATTGGGTTTGTTGGCTCTGTTCATCTTCCTCTTTATCTTAGGGTTGCACGGGCAGAACCTCCCCGCCGACGTGGCGCAGGTGGTTGATCTGCTGGAGCGCCACTGCTTAGCTCCGGATGGATCTCTGATCTCGAAGGCTGTCTTCAACGATCTCCAACTCGCCAGAGAGGAAATGTGCAGGGAAAGACTGCGTTATCTCGAAGCCATGGCTATATATTCTGAGGCTATTGCAATGGTGGAAGAGTATCAGCAAGCCATTTCTGTGTCCAACCTAGGTGGAATTAGAGATACCGGCAATCTTTATCCACAGCTCGGCTTCATGAACTCTCCTCAGGTTTATCAAACTTTAGAACATCAAATGGTTGTTGCTGAAGCAGCTCAACGATTGAGACTGCCTCTTATCTCCAAAGATGGGGAAGTTCATGACGAAGACATTGAAAAGCTAAGTGTAGTATCTCGAAGCTCCCTTGAAAGTACTGTTAGTGGGGCTAATTCTTCTAACTATAACACTCCAACCAGCTCTGTTAGTGGGGCTAATTCTGCTCTTGCTTCTTCGGATCCCGTGGAACTTGGAGTTGGTGGTGTTCCCAACCGTTTTTTGGGGATTACACCTGCATATTTGTGGCAAACTCAGCATCGAACAACACCATTATCCATGGATATGACTGAATATCGCTTGTCTCTTTCACGGGAGGTAGAGGCTCGCTTGAAAATGAAATGTGAAAAATTATCAGACGCTTTTGTGTTGGATGACAATGATTCATCATCTGGAAGTCAAAGTTCAAGTTCTCGGCTTCCAGAAAGGGTGAAATTGTTGATTGAGGAGATTGAAAGAGAAGAAACAGCATTGCGGGATGATCTTTATTCTGCGGATAGAAAGTTTGCTGAATATTACAATGTTTTGGAGCAGATACTTGCAGTGCTTATTAAACTTGTCAAAGATTTGAAGTTGGAGCACCAGCATAAATACGATGAACTGCAAAAGACTTGGCTCTGTAAAAGGTGTGAGACCATGAGTGCAAAATTGAGTGTTCTGGAACACGTTCTCCTGCTCGAAACTTACACTAAGGACTCTATACCTGCCCTTCATAAGATAAGGAAATATCTTGTTACCCGCCTGCGTGAGTACCAGGGTGTTGATCCTCACTTTGACAACATAGCAAGACAGTACCATGACATTGTGCAGAAATTGGAGAACATGCAATGGACAATCCACCAAGTTGAAATGGATCTGACACGTATGCCAGATAAACCCAGCGCATAACAAATTTTTAATGCTTTGTGTCGTTATCTTGCTTTAAATAACTTCTTGTAAATGATACTAAAGGCATCCCTCCTTCCTTAACCTAGCACTCATCATGTCCCTTCAATCTGAGTTTGTTTAAATATTTGGGCTACACTACATTACCTGATACAGAAGAAAAAGGAATCCTCAAAACCAGTTTAAGGTGGCAATAGAATTGGGATCTTTATTCTTTTGCATTTAGTCAGAGTATTTTTATATGCATCATTTTAAGACTAATATTTTTAAAGACATTAGCTTGATTGAGAAGTTCTTGAATGGAAAATCTCCA 2234 0.4212 MCKKPQNRKQCVIDKLQSTFHQWKSNSDVAEQGRLVKEVLAGCESIEWQVDELDKAIAVASRDPSWYGIDEVEIENRRKWTSSALEAGKGSSNTSHASVNGMRQELMRLPNSHQTDTSNLYAARDSDDFIQSESDRQMLLIKEQDEELDELSESVRRIGGVGLTIHDELTAQEKILDELGSEMDSTTNRLDFVQKKVAMVMKKASAKGQIMMILGLLALFIFLFILGLHGQNLPADVAQVVDLLERHCLAPDGSLISKAVFNDLQLAREEMCRERLRYLEAMAIYSEAIAMVEEYQQAISVSNLGGIRDTGNLYPQLGFMNSPQVYQTLEHQMVVAEAAQRLRLPLISKDGEVHDEDIEKLSVVSRSSLESTVSGANSSNYNTPTSSVSGANSALASSDPVELGVGGVPNRFLGITPAYLWQTQHRTTPLSMDMTEYRLSLSREVEARLKMKCEKLSDAFVLDDNDSSSGSQSSSSRLPERVKLLIEEIEREETALRDDLYSADRKFAEYYNVLEQILAVLIKLVKDLKLEHQHKYDELQKTWLCKRCETMSAKLSVLEHVLLLETYTKDSIPALHKIRKYLVTRLREYQGVDPHFDNIARQYHDIVQKLENMQWTIHQVEMDLTRMPDKPSA 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01285 633 CDD SNARE_Qc 141 198 - -
Pste7g01285 633 MobiDBLite consensus disorder prediction 372 394 - -
Pste7g01285 633 ProSitePatterns Syntaxin / epimorphin family signature. 144 183 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pste7g01285 633 FunFam syntaxin-61 isoform X1 141 202 - -
Pste7g01285 633 Pfam SNARE domain 175 226 IPR000727 -
Pste7g01285 633 FunFam Syntaxin 10 9 87 - -
Pste7g01285 633 Pfam HAUS augmin-like complex subunit 4 404 622 IPR029327 GO:0051225|GO:0070652
Pste7g01285 633 Gene3D - 145 209 - -
Pste7g01285 633 SUPERFAMILY t-snare proteins 13 83 IPR010989 GO:0016020|GO:0016192
Pste7g01285 633 Coils Coil 176 196 - -
Pste7g01285 633 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 231 624 IPR029327 GO:0051225|GO:0070652
Pste7g01285 633 SUPERFAMILY SNARE fusion complex 136 200 - -
Pste7g01285 633 Gene3D - 7 94 - -
Pste7g01285 633 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 138 200 IPR000727 -
Pste7g01285 633 SMART tSNARE_6 133 200 IPR000727 -
Pste7g01285 633 Pfam Syntaxin 6, N-terminal 13 83 IPR015260 GO:0016020|GO:0048193
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01285 Pste-Chr7 11684685 11700201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01285 49 226 SNARE and Associated Proteins AT1G28490 66.489 1.46e-79 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01285 7 11684685 11700201 Pste7g01285 7 11684685 11700201 ECH