Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01276 GAGGGTCCATAATGGGGATAACTGCAGGAGCAATCAAAGGCCATACAAGAGGAGCTGGTTTTCTTGATGGGGCTTGCAAAGGGGCTGTCACAGGGGCCATTGCAGCATTAGAATTCCTAAATATTGTTGCTTATGATGAGCCACAGTCTAAGGTTGCCCTATTGAGGAGTCTATTAAATGGAAAGCTATTTATGGAATGGATATGTCCTGTTGTTGCACAAGCCTATCAATGTCATATCAATGCACATGGAACAATTTACAGAGAAGAACCAGATATTCAAAATGGCATTGTCAGGGAAATAAGAATCAAAGGGATGGCTTGGAATATCATTCAAAAGCTTCCTGTTCAACAATTCAATTCCACTGAAGTATTGAAATTATACAATGAATCATGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGAAGAATTTGTGAAGATACTTCCAAAATGCGGCCACTTTTTTCACATAGTCTGCATAGACAAATGGCTAGTCCAACAAGGATCATGCCCCATGTGTAGAATTTATGTTCCACATTTATGAATTTGCAGCTGATTGTAGCTCGG 568 0.3996 MGITAGAIKGHTRGAGFLDGACKGAVTGAIAALEFLNIVAYDEPQSKVALLRSLLNGKLFMEWICPVVAQAYQCHINAHGTIYREEPDIQNGIVREIRIKGMAWNIIQKLPVQQFNSTEVLKLYNESCCSICFQDFEDEEFVKILPKCGHFFHIVCIDKWLVQQGSCPMCRIYVPHL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01276 177 SMART ring_2 129 170 IPR001841 -
Pste7g01276 177 SUPERFAMILY RING/U-box 120 175 - -
Pste7g01276 177 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Pste7g01276 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 176 IPR013083 -
Pste7g01276 177 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 2 171 IPR044523 -
Pste7g01276 177 Pfam Ring finger domain 129 171 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01276 Pste-Chr7 11641523 11643212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01276 1 171 C3H Transcription Factor Family AT5G66070 31.319 7.52e-28 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01276 7 11641523 11643212 Pste7g01276 7 11641523 11643212 ECH