Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01251 ATGGAGCTGAGTTTGGATTTGAGTTTGTCCTTTGTCCCCAGAAGAAGCGTTTGTGAGATTCTTGGTGTAGTTTCTCAGAGCAAAGATGGGTCTCAGAGAATGACCACGCTTGAGGGCTTTGTCGAAAGGTTGGAAGATGAGAAGAGGAAGATCGAGGCCTTCAAACGTGAGCTTCCTCTTTGCATGCTCCTTGTAAACGATGCCATAAGTAAATTGAAAGAGGAAATGAACGGGGGTGTCAGCTTGAAAGATGAATCCGTTGTTGGAGACTTGAGGCCACTAATGAAAACCAATTCTGAAGGAAATGGGTCTTTGAACATGGCTAAGGAAAGCAGTGACATGAAGAATTGGATGGACTCTGTTCAGCTATGGAACCAGAGGAATGTGGAGGATGATCGGTGTGTACCCAACAATCCAATTGAACCCAAGAAGGAGGCCAGCAAGAGTGGAAGAGCATCATTAACATTAATTGGAAACAAGTGTGTCTCAAAGACAGTGATGAGGAATGACAAGGAGGTGTCACAGGTTCCCAGCCTTGATTTGATGACCCCAGTGTTTGAATTGAATCATAGGAAAACAGAAAGTGGATATGGAAATGGTGAATCTTTGATTACAAGCTCAGCTGAGATAAAGGGTCAATCACAACTTCAGCAGAATCTGAGGAAACAAAGACGATGCTGGTCACCAGATCTTCATCGGCGATTTATTGATGCCCTTCAACAATTAGGGGGACCACAAGTGGCCACTCCAAAGCAGATCAGAGAACTGATGCAGGTGGTAGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGGCTTCATTTTAGAAGGCCTCAAGTTTCTTCAGTTGGTCAGGTAAAAAGTGGCTTAAGCATGATGATGGTACAAGATAAAAGTGGAGATAACAAATCAAAAGGAAACTCATCACATTCTGGCTCTCCACAAGGTCCTCTCTTCCTAAGAGGGTCAGGTAAGGGTCTTTCAAGTTCTGGACGCAACAGCATGGACACAGAAGAAGATGAACAATCAGATTGCCACAATTGGAAAAGTGGGCTTCACCAGCAACCAGAAGCTGAGGATTTCTGAGCTTCTAAAGTTTTCA 1111 0.4383 MELSLDLSLSFVPRRSVCEILGVVSQSKDGSQRMTTLEGFVERLEDEKRKIEAFKRELPLCMLLVNDAISKLKEEMNGGVSLKDESVVGDLRPLMKTNSEGNGSLNMAKESSDMKNWMDSVQLWNQRNVEDDRCVPNNPIEPKKEASKSGRASLTLIGNKCVSKTVMRNDKEVSQVPSLDLMTPVFELNHRKTESGYGNGESLITSSAEIKGQSQLQQNLRKQRRCWSPDLHRRFIDALQQLGGPQVATPKQIRELMQVVGLTNDEVKSHLQKYRLHFRRPQVSSVGQVKSGLSMMMVQDKSGDNKSKGNSSHSGSPQGPLFLRGSGKGLSSSGRNSMDTEEDEQSDCHNWKSGLHQQPEAEDF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01251 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 219 279 IPR017930 -
Pste7g01251 364 SUPERFAMILY Homeodomain-like 220 280 IPR009057 -
Pste7g01251 364 Gene3D - 221 279 - -
Pste7g01251 364 MobiDBLite consensus disorder prediction 299 319 - -
Pste7g01251 364 Coils Coil 37 57 - -
Pste7g01251 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 19 352 IPR044787 GO:0003700|GO:0006355
Pste7g01251 364 FunFam Myb family transcription factor 221 279 - -
Pste7g01251 364 Pfam Myb-like DNA-binding domain 224 275 IPR001005 -
Pste7g01251 364 MobiDBLite consensus disorder prediction 337 364 - -
Pste7g01251 364 MobiDBLite consensus disorder prediction 299 364 - -
Pste7g01251 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 222 277 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01251 Pste-Chr7 11462355 11464545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01251 1 278 G2-like Transcription Factor Family AT4G37180 38.408 5.39e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste7g01251 Myb_DNA-binding 2.2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01251 7 11462355 11464545 Pste7g01251 7 11462355 11464545 ECH
Pste7g01251 7 11462355 11464545 Pste1g02474 1 9056072 9058354 PCT