Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01241 AGACAGAGGAAAAAGAAAAGGCGCGATCAGCGACACGTTTTTGTCGCGGCACGAGAACAAAAAAGAGAGAGTTTGAAATTACAAACCCACAAGATTAGGGTTTTGCACTCCCAACTCACTTCTCTTACCTGCTTCATCTTCCTCTTCTTTCGCCTTCCCAAAATGGTGAACCCAAGATGCTTCCTTGACGTCAGCATTGGCGGCGAGTTAGAAGGCAGGATTGTCGTCGAGCTCTTCCACGACCTCGTTCCCAAAACCGCCGAGAATTTCAGAGCCCTATGCACCGGCGAGAAGGGCATCGGTCCCAACACCGGCGTCCCCCTCCACTACAAGGGCGTTTGCTTCCACCGCGTCATCAAAGGTTTCATGATCCAGGGCGGCGACATCTCCGCCGGCGACGGCACCGGCGGCGAATCCATCTATGGCTTGAAGTTCGAAGACGAGAACTTGGAGCTCAAACACGAGCGCAAGGGCATGCTCTCCATGGCCAACGCGGGACCCAACACCAACGGCTCTCAGTTCTTCATCACCGCCACTCGCACCCCTCACTTGGACGGAAAGCACGTCGTTTTCGGCCGTGTTCTTAAAGGAATGGGTGTCGTTCGCTCCGTCGAACATGTCGTTACCGGCGAAAATGACCGTCCCTCTCAGGATGTTGTGATCGTCGATTGTGGGGAGATTCCTGAAGGGGAAGATGATGGAGTTGTTAACTTCTTTAAGGACGGTGATACTTATCCTGATTGGCCCGCTGATCTTGATAAGCAAGATTATAAGATGGCTCTCAGAAAGTATCGGAAAGCATTGCGCTATTTGGATGTGTGTTGGGAGAAGGAAGACATTGACCAAGAGAACAGTGCTGCTTTAAGGAAGACAAAATCTCAAATCTTTACAAACAGTGCTGCTTGTAAATTGAAATTAGGTGATCTACAAGGAGCATTACTGGATTCTGACTTTGCAATGAATGATGGAGATAATGCGAAAGCTCTGTTTCGCAAAGGCCAGGCATATATGTTACTCAACGACCTAGATGCTGCTGTTGAAAGCTTCAAGAAAGCATTAGAGTTGGAGCCAAATGATGGAGGGATTAAAAAAGAGTATGCCACTGCCAGGAGGAAGGTAGCTGATAGACGTGATCAAGAGAAAAAAGCTTATTCTAAAATGTTCAAATAGAGTTCTTGCTATGGTACATGTAGCTAAAAAATCAGATATTTGTGACGGGGCACGTCAATTACAGAGTCAACAATTTCTGATTTTTCTTTGTCAGTAGTTATGGAAAAACATCAAATATAGTGAACATTTTTTAATTTCATGCTTTCTAGATTGTGAAGTTGTGAGAGAGCTATTCATATCATCATACTTTTTTTCTTCTGTCAAACTCTTGACTATGAGCCGTTAACCGGTGATTTTTTTGTAAAAGAGACAGGCAGATTGAGACATATCTCAGAATGAGACTCGCGACTTGCTTTCCCTGA 1472 0.4579 RQRKKKRRDQRHVFVAAREQKRESLKLQTHKIRVLHSQLTSLTCFIFLFFRLPKMVNPRCFLDVSIGGELEGRIVVELFHDLVPKTAENFRALCTGEKGIGPNTGVPLHYKGVCFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENLELKHERKGMLSMANAGPNTNGSQFFITATRTPHLDGKHVVFGRVLKGMGVVRSVEHVVTGENDRPSQDVVIVDCGEIPEGEDDGVVNFFKDGDTYPDWPADLDKQDYKMALRKYRKALRYLDVCWEKEDIDQENSAALRKTKSQIFTNSAACKLKLGDLQGALLDSDFAMNDGDNAKALFRKGQAYMLLNDLDAAVESFKKALELEPNDGGIKKEYATARRKVADRRDQEKKAYSKMFK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01241 389 FunFam Peptidyl-prolyl cis-trans isomerase D 51 232 - -
Pste7g01241 389 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 61 226 IPR002130 GO:0000413|GO:0003755
Pste7g01241 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Pste7g01241 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 173 IPR002130 GO:0000413|GO:0003755
Pste7g01241 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 IPR002130 GO:0000413|GO:0003755
Pste7g01241 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Pste7g01241 389 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 93 IPR002130 GO:0000413|GO:0003755
Pste7g01241 389 Pfam Tetratricopeptide repeat 326 359 IPR001440 GO:0005515
Pste7g01241 389 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 110 127 IPR020892 GO:0003755|GO:0006457
Pste7g01241 389 SMART tpr_5 326 359 IPR019734 GO:0005515
Pste7g01241 389 ProSiteProfiles TPR repeat profile. 326 359 IPR019734 GO:0005515
Pste7g01241 389 Gene3D - 51 233 IPR029000 -
Pste7g01241 389 SUPERFAMILY TPR-like 253 386 IPR011990 GO:0005515
Pste7g01241 389 ProSiteProfiles TPR repeat region circular profile. 326 359 - -
Pste7g01241 389 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 62 225 IPR002130 GO:0000413|GO:0003755
Pste7g01241 389 Gene3D Tetratricopeptide repeat domain 251 389 IPR011990 GO:0005515
Pste7g01241 389 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 227 - -
Pste7g01241 389 MobiDBLite consensus disorder prediction 370 389 - -
Pste7g01241 389 CDD cyclophilin_ABH_like 58 225 - -
Pste7g01241 389 FunFam peptidyl-prolyl cis-trans isomerase D 250 389 - -
Pste7g01241 389 SUPERFAMILY Cyclophilin-like 47 229 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01241 Pste-Chr7 11398985 11406463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01241 72 224 U-box Gene Family AT5G67530 45.455 1.22e-35 135