LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g01236	AAAAGGGTTCAAGATGACACATTGACTTTATGTGAAAGGGGCTTTTGTTTTTAAGTCTTCCTCTTCGTCTCTATTAAAGCCAGCCATCATCGTTCATCGTGGTCGATGTGAAGGGAACCGCGAAACAAACGCAGATGATGATGATGGCTGTGGTTAGCGATTTACATTGCGCTCCATGGCCATAGCGAACTGCATTGTAAAGTAAAGGTTTCTTTGATTCTCTCCATAGACGGAACAATGCGGTGGTTAAATACGCTTTCGTTCTCCACTTCCAATTCGTCATCGTCTTCCTCTTCCGCCGACAACCGCCGGAAGCCTTGGCTCTTCGGAAATTCGTCCAAGAAGCGCTCCTGCCACGTCTGCGATCACGACGACGATGCACTCGTTCTTTCCCCCGGCACGCCTCAGCCGTTGCCGTTGCCGGAGCTTTCTTCCGCCGCCGTGCTCCGTCAAAGAGACGGTGACTGCCGTCTTCCCTCGCCCAAGGATGCTCCACCCGCCACCACCACCGCCTGTCGGATGCGAAGTGTTTTTGCTAGTCCAGAGACGAGAAGGAATATGGAGCAGGCTGAAACTAGGTCATCAAGAATGGTGCATCAAGATACGACTGGTTGTTGTGAGGGTACTCGAGATAATATTCATACTAATAATAATAACTCGGGGAATGTCCCTCGCAGGAGGAGTACTTCGGGTAGTCCTTTTGCAAGTCCTTCGATGAGTCCACAGAAAACAAGGAATGGCGAGCTTTTGCCTTATTATTATTTGCGTCCAGGAAATCGGATCTGGTCTGCACCAGACTTGTCTACCCTTGAAGCAGGGTTGATACCTCCTGCATTCTTTGATTTATCTGCATTAGCCACAGAAGCTTCTCCCTCTCCCACATCGCATCAAAGTCCACAGAGGAAAAGTCTCCAGCAACACACCAGAACCTCGAGTGGACCTCCATCCCCCATACATACCATGTTATCACTCGAAAACTCAACAGCACGCCGTGAAAGTAACGCTCCACCTGTCAGTGTTCACCCCTTGCCCCTTCCTCCTGGGGCTTCTGTCCATTCACCGCCAGCTGCTGGTGCCTTTTCCCATTCCATGACTAGGTCAGAATCGTTTCCGATGAAAAGCCAATGGCAGAAAGGGAAACTTATTGGGCGTGGCACATTTGGAAGTGTTTATGTTGCAACTAATAGGGAAACTGGAGCATTGTGTGCAACGAAGGAAGTAGAAATATTTCCTGATGATCCAAAATCTGCAGAGTGTATAAAACAGTTGGAGCAGGTTAAGGACCGATTTTATATATATCTGGAATATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGATCATTGTGGTGCCATAACAGAATCTGTCATTCGGAATTTCACTCGCCATATTCTTTCAGGATTGGCTTATTTACATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGACTCTGCTGGAGTTGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATGCTTTGTGGCTTATTTATGATATGGAATTGAGTTGTTCCAATAAATTTAATTTGTACATGAGGTGTTTCATCAAGTTTATAACTTGTGATCTTTATGTTGCACAGCTAACTGGGTTTGAAGCAAATCTTTCTTTGAGGGGAAGTCCATATTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATGCAAAAGGATAACAGCCCTGATCTTGCTTTCGCAGTTGATATTTGGAGTTTGGGTTGTACCATCATTGAAATGTTCACAGGGAAGCCTCCCTGGAGTGAGTATGAAGGAGCTGCGGCTCTATTTAAGGTTATGAAAGAGACCCCTCCTATACCTGAAACATTGTCATCGGAGGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGAAATCCAGCAGAGAGGCCAACGGCTGCAGCTTTACTGGAACATCGATTTTTGAAAAACTCACAACAGCCTGATGTTCTATCTCCCACCCGGCTTTATAATGGAACAGGCTTCATGGACAAACCACATAGTCCTTGTAGACAATCTGAAAATAAACATGATCAGTTGTCCATCCCCTGTGCAAAGATTGCAATGGGTAAAGCAGCTGAGAGACCCGGATTTCTCGTTCCTTCGTTAGATGTTCTCCCTGCCTACTTGAACCTATAACGTAATCCTGTTTTCAGTCTTTTTAGCTGCATGATCTATTGTCCACTTTTCATGCGCCATTCTTTTTCTATGCCGAAGTTGGGAATTTTCTCACAAGTCATAGTAACTTCCACGTAGCAGTGGTGGCACAGTGTTTTTTCTTCCCTCTGCTCTTGAAGCAGTTCCTACACTGTACATTTGCTTGCTAGGTACAATACACACAGTCCAATACCTTTTGATTATCTGTGACTGTCAAAAGAAAACACAATCATCTTTTCAAAATGACTGCGCTGGGGGAAGTTTTCGTTATTTAGGCCAATGACGGTCCCATTGTAGTAGTATAGTTTAAATGGACGCTCGTGTTGCAGCTGTTGCTGTCATAGGTTCTCTTTTGCTTAGTTTTTCATTGATAAAAGTGAAGAGCTTTTGCAGTCTGTAAGTTATGCTGCACAAAAATATAGCAGCATTTTTAGAATAGTATTATTATACTAACTTAGAGCGATGAAGCAATTAACCTTCTAAGGTGCATATTTATACTTCCGGGTCTATATTAGGACGAAGTCAATATTATGTAGACATTAGTGTGCATCCCTCTTGGTTTCGTTGGGATTCTGATTTGGTTGTTTATGTTAGATGTGTCAGTCCAGTCCAG	2797	0.4415	MRWLNTLSFSTSNSSSSSSSADNRRKPWLFGNSSKKRSCHVCDHDDDALVLSPGTPQPLPLPELSSAAVLRQRDGDCRLPSPKDAPPATTTACRMRSVFASPETRRNMEQAETRSSRMVHQDTTGCCEGTRDNIHTNNNNSGNVPRRRSTSGSPFASPSMSPQKTRNGELLPYYYLRPGNRIWSAPDLSTLEAGLIPPAFFDLSALATEASPSPTSHQSPQRKSLQQHTRTSSGPPSPIHTMLSLENSTARRESNAPPVSVHPLPLPPGASVHSPPAAGAFSHSMTRSESFPMKSQWQKGKLIGRGTFGSVYVATNRETGALCATKEVEIFPDDPKSAECIKQLEQVKDRFYIYLEYVHPGSINKYVRDHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHALWLIYDMELSCSNKFNLYMRCFIKFITCDLYVAQLTGFEANLSLRGSPYWMAPELLQAVMQKDNSPDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSSEGKDFLRCCFKRNPAERPTAAALLEHRFLKNSQQPDVLSPTRLYNGTGFMDKPHSPCRQSENKHDQLSIPCAKIAMGKAAERPGFLVPSLDVLPAYLNL	642

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g01236	642	MobiDBLite	consensus disorder prediction	117	166	-	-
	Pste7g01236	642	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	13	584	-	-
	Pste7g01236	642	SUPERFAMILY	Protein kinase-like (PK-like)	284	595	IPR011009	-
	Pste7g01236	642	MobiDBLite	consensus disorder prediction	103	166	-	-
	Pste7g01236	642	Gene3D	Phosphorylase Kinase; domain 1	277	362	-	-
	Pste7g01236	642	ProSiteProfiles	Protein kinase domain profile.	297	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste7g01236	642	Pfam	Protein kinase domain	298	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste7g01236	642	MobiDBLite	consensus disorder prediction	1	29	-	-
	Pste7g01236	642	MobiDBLite	consensus disorder prediction	209	285	-	-
	Pste7g01236	642	Gene3D	Transferase(Phosphotransferase) domain 1	363	584	-	-
	Pste7g01236	642	MobiDBLite	consensus disorder prediction	1	27	-	-
	Pste7g01236	642	MobiDBLite	consensus disorder prediction	209	255	-	-
	Pste7g01236	642	SMART	serkin_6	297	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g01236	Pste-Chr7	11383926	11389252	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g01236	153	610	MAP Kinase Kinase Kinase	AT5G66850	56.574	0.0	528

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE-Pl	Pste7g01236		Pkinase	9.1e-48	CL0016