LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g01219	CGCAACAGGAAGTCATTGAAGAAGACCATTAAAAAATATTATGAAGAAAAAACTTTGGCCTCATTTGCTGATATCTCTTTTGCAACAGAGTTTAGAAAACAAATTATCAAGTTAAAGGTAGAAAATAGGTTGTCAAGGATAAATACCAATGTTGGAAACTTGAACAAATTTTATCTTGTAGATCGTGGAAAACAAAAGTTTATAACAGAAGAGATAGCAAAGCTTGGGAAAGGAAACATTACTTCTAAGATTTTTTCTTACCGTGAACTATGTGTCGCAACTCAAAACTTTCACCCTACTAATATGATTGGTGAAGGAGGCTTTGGGAGGGTATACAAAGGACACATTAAAAGCACAAATCAAGTTGTTGCTGTTAAGCAACTTGACAGGAATGGATTTCAAGGGAATCGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCTTACCTTGTCAACTTGGTAGGGTATTGTGCTGAAGGTGAACATAGGATTTTGGTATATGAATACATGGTCAATGGTTCTTTAGAAGATCATTTACTTGAATTAACTCCGGATAAAAAGCCTTTGGATTGGCATACTAGAATGAAAATTGCAGAAGGTGCAGCAAAAGGACTTGAATATTTGCATGAAGAAGCAAACCCTCCAGTAATATATCGTGATTTTAAAGCATCTAACATACTATTAGACGAAAACTTCAATCCAAAACTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAATAGGAGATAAATCCCATGTATCCACTAGAGTAATGGGAACATATGGCTATTGTGCTCCTGAGTATGCATCAACAGGGCAATTGACCACAAAATCAGATGTATACAGCTTTGGGGTAGTATTTTTGGAAATTATCACAGGAAGAAGAGTAATTGAATATTCAAGACCATCAGAAGAGCAAAATTTAGTCAATTGGGCACAACCACTTTTGAAAGATAGAACAAAATTTACACAAATGGCCGATCCATTGCTAGAAGATAACTACCCAATAAAGAGTTTATATCAAGCTCTAGCAGTAGCAGCTATGTGTCTTCAAGAAGAAGCAGATACCCGACCTTTGATCAGTGATGTAGTTACAGCCATTGAGTTTTTAGCAAGGAAGAAACTAGAAACAAGTGAACCACAACATACAAAAGAAACTTCTTCCACTAAAGATGGAGATGATGCTAAACAGAAAGAATCATCATCTAGGGAAGAAAACGATGGGAACGAGAACGAGGATGAGGATGAGGATGACAACAATGACAATAATAACAATGATAAAGAATATAAGAACAATGATTTTAATAAAAGGAATAATGGATACGAA	1338	0.3558	RNRKSLKKTIKKYYEEKTLASFADISFATEFRKQIIKLKVENRLSRINTNVGNLNKFYLVDRGKQKFITEEIAKLGKGNITSKIFSYRELCVATQNFHPTNMIGEGGFGRVYKGHIKSTNQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPYLVNLVGYCAEGEHRILVYEYMVNGSLEDHLLELTPDKKPLDWHTRMKIAEGAAKGLEYLHEEANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPIGDKSHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVFLEIITGRRVIEYSRPSEEQNLVNWAQPLLKDRTKFTQMADPLLEDNYPIKSLYQALAVAAMCLQEEADTRPLISDVVTAIEFLARKKLETSEPQHTKETSSTKDGDDAKQKESSSREENDGNENEDEDEDDNNDNNNNDKEYKNNDFNKRNNGYE	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g01219	446	Gene3D	Phosphorylase Kinase; domain 1	82	173	-	-
	Pste7g01219	446	MobiDBLite	consensus disorder prediction	381	446	-	-
	Pste7g01219	446	FunFam	Serine/threonine-protein kinase CDL1-like	68	173	-	-
	Pste7g01219	446	SUPERFAMILY	Protein kinase-like (PK-like)	81	371	IPR011009	-
	Pste7g01219	446	CDD	STKc_IRAK	103	372	-	-
	Pste7g01219	446	MobiDBLite	consensus disorder prediction	381	409	-	-
	Pste7g01219	446	Pfam	Protein kinase domain	99	368	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste7g01219	446	Gene3D	Transferase(Phosphotransferase) domain 1	174	401	-	-
	Pste7g01219	446	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	220	232	IPR008271	GO:0004672\|GO:0006468
	Pste7g01219	446	PANTHER	OS07G0668900 PROTEIN	69	385	-	-
	Pste7g01219	446	MobiDBLite	consensus disorder prediction	410	426	-	-
	Pste7g01219	446	FunFam	Serine/threonine-protein kinase PBS1	174	390	-	-
	Pste7g01219	446	ProSiteProfiles	Protein kinase domain profile.	97	374	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste7g01219	446	ProSitePatterns	Protein kinases ATP-binding region signature.	103	126	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g01219	Pste-Chr7	11292437	11295008	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g01219	79	408	Glycoside Hydrolase	AT3G07070	65.179	3.62e-164	467

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Pste7g01219		Pkinase	6.8e-48	CL0016