Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01216 CAAATTTAATTTGGTTGTTTCCGTTGGGTGCAACAAAAAAGGCGAAACTCTCGTCGTTTCCTCTTGTTATCACTTTCCTCAGATCTCTCTCTTTTCCCGTTTCTTCTTATTCTTAAACACCGTCAACAAAACCCAACCTTAACTACCACAAACCCCATTCATTTTCCACTTCCCATTTTCCAAATCTCCTTTGACTTTGAGCTGAGATCATATCACAATGGGTCTCTGCAATTCAAAGCCAAATGCAGACCCCACTCTCGGTTCTTCTCCCAATTCACACGCCCACTACACAGACACCAATGCCAATCAACAATCACAAAACAAATCCACCCCCTCCCATAAAAAATCTCCGCTTTTTCCCTTCTACACTCCCAGCCCGGCCCACCACTACTTCTCCCGCAAGTCTCCTGCCCCGACCACTCCCCGGCGGTTCTTCAAGCCGCCCTCGCCGGCCAAGCATATTCGGGCCGTGCTGGCCCGGCGCCATGGGTCGGTGAAGCCCAACACTATCCCAGAAGATGAGGTGGTTGCTCTTGACAAGAACTTCGGATTCTCGAAACAGTTTGAGCACAAGTTCGAGGTTGGGGATGAGGTTGGACGAGGACACTTTGGTTACACTTGTGCTGCTAAGTTTGTTAAGGGCCAACTCAAAGGCCAACAAGTTGCTGTCAAAGTCATCCCCAAAGCCAAGATGACCACTGCAATTGCTATTGAGGATGTGAGGAGGGAGGTGAAGCTATTGAGGGCCTTGACTGGACATAGGAATCTGATTCAGTTCCATGATGCATATGAGGATAATGATAATGTCTACATAGTAATGGAGTTGTGCGAAGGAGGGGAGCTTTTGGACAGAATATTGTCAAGAGGGGGGAAATACACGGAGGAAGATGCCAAAGGTGTCATGATACAGATACTGAATGTTGTTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAATTTCTTGTTCACGTCCAAAGACGAGAACTCTGAGTTGAAGGCCATTGACTTTGGATTGTCAGATTTTGTCAAACCAGATGAAAGACTTAATGATATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTCTGCATAGAGCTTACAGTACAGAGGCTGATGTTTGGAGTGTTGGTGTGATTGCATATATTTTATTGTGTGGCAGCCGTCCATTTTGGGCACGGACTGAATCCGGGATCTTTCGAGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTATCTGATGAGGCAAAAGATTTTGTTAAGAGACTTCTAAATAAAGATCCAAGGAAAAGAATGACAGCAGCGCAGGCATTAAGTCATCCATGGATTAAAAATTATAAGGATGTAAAAGTACCTTTGGATATTCTCGTGTTCAAGCTCATGAAGACATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTTTGTCGAAGACATTAGCTATTGAAGAGCTGCAATATTTGAAGGAGCAGTTTGAACTTCTAGAACCAAACAAAACTAACACTATTAGCTTGGAAAATATCAAAGCGGCTTTGATGAAGAATGCGACAGATGCTATGAAGGAATCACGCATTCCTGATTTTCTAGCATCACTTAATGCATTGCAATATAGAAGGATGGCTTTTGATGAGTTCTGTGCAGCTGCTCTTAGTGTTCATCAACTTGAAGCACTTGACCGCTGGGAGCAACATGCACGCTGTGCCTATGAACTTTTTGAAAAGGATGGAAACAGGGCTATAGTCATTGAGGAACTAGCTTCGGAGCTTGGTCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTTCACGACTGGATTAGGCACACTGATGGAAAGTTGAGCTTTCTTGGATTTGTTAAGTTATTGCATGGCCCATCTCGAAGTCTTGCAAAACCTCACTAGGAATTTGGAGGATCTAAGCATGCCCAACTATACTTATGATAATCTGGCCAACATCAAGGGCTCTTTGCCACTGTTGGATTATACACAACATAAATTATCAGGGACTCTGTCCCTCATTTTATACTGGAGCTCTTCTACACGTGGGGGCAGGAGTCAAACCTGCTTCTATAGGCATTTATATTTTCCACTGTAAAAAGCTGTAGCGTGTTTAAGGTGCAGGTGATAATGTTTTCTGACTGTTGTTAGATGGTTACTCTTAATACTCTAACATGGTCTGAGATTCAGAATTGAGAAGTATCAATCTTGCCCAAATGCAAACTGAATTCATTGCATTGCTTCTGAG 2282 0.4378 MGLCNSKPNADPTLGSSPNSHAHYTDTNANQQSQNKSTPSHKKSPLFPFYTPSPAHHYFSRKSPAPTTPRRFFKPPSPAKHIRAVLARRHGSVKPNTIPEDEVVALDKNFGFSKQFEHKFEVGDEVGRGHFGYTCAAKFVKGQLKGQQVAVKVIPKAKMTTAIAIEDVRREVKLLRALTGHRNLIQFHDAYEDNDNVYIVMELCEGGELLDRILSRGGKYTEEDAKGVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSVGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALSHPWIKNYKDVKVPLDILVFKLMKTYMRSSSLRKAALRALSKTLAIEELQYLKEQFELLEPNKTNTISLENIKAALMKNATDAMKESRIPDFLASLNALQYRRMAFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKPH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01216 573 SUPERFAMILY Protein kinase-like (PK-like) 118 411 IPR011009 -
Pste7g01216 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Pste7g01216 573 SMART serkin_6 120 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01216 573 FunFam CDPK-related kinase 1 113 208 - -
Pste7g01216 573 Gene3D - 400 561 - -
Pste7g01216 573 FunFam CDPK-related kinase 3 112 284 - -
Pste7g01216 573 Pfam Protein kinase domain 120 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01216 573 Gene3D Phosphorylase Kinase; domain 1 113 208 - -
Pste7g01216 573 CDD STKc_CAMK 119 381 - -
Pste7g01216 573 MobiDBLite consensus disorder prediction 1 44 - -
Pste7g01216 573 Gene3D - 422 491 - -
Pste7g01216 573 FunFam CDPK-related kinase 1 419 491 - -
Pste7g01216 573 MobiDBLite consensus disorder prediction 1 47 - -
Pste7g01216 573 SUPERFAMILY EF-hand 410 564 IPR011992 -
Pste7g01216 573 Gene3D Transferase(Phosphotransferase) domain 1 209 395 - -
Pste7g01216 573 PANTHER SERINE/THREONINE-PROTEIN KINASE 106 548 - -
Pste7g01216 573 FunFam Calcium-dependent protein kinase SK5 292 387 - -
Pste7g01216 573 ProSiteProfiles Protein kinase domain profile. 120 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01216 573 ProSitePatterns Protein kinases ATP-binding region signature. 126 152 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01216 Pste-Chr7 11260867 11265078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01216 1 573 EF-hand Containing Proteins AT3G50530 73.101 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste7g01216 Pkinase 1.4e-70 CL0016