Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste7g01215 | CCCTTCCAAAAACCTGCGGCAAATAAAACCACCAAAACAATGTCGCCGAGCTTCGTCTTCGACCCTCCGAGCGACGAAGAAATTGAACACTCTGAGCAAGAAGAAGAAGAAGAATCAGAAGACGAAGAAGGATCACAAGAAGGTGATTCAGCATCAGAACCTGACTCAGAAGGAGAAGGAGAAGAAGAAGGGCGCAAAGAAAAGCGGGTTTTGAAGAAGAAAACACAGTCTCCATGGGACTTCGCTAAGTACACAGAATCTGTTGCCGAGGAACATGCTCGCAGGAGTACAACCTCGGTCGACGAGAAAATCTCCAAAGCACTCAGACAACGTTCTACGCCGCTCGTTGCTGAGCTCGACCATAGCTCCGAATCCGAACCTGATGATGAACAAGAAGATTATAGACCAGAGGAAGAAGATGAAGAAGAGGGTAATGGGGGTGATAGCAAATCCTTTTTTGCTCCTTCTGATGGAACCTCTTTCCATGCTGATTCCTTCTTGCAACTCAATTTGTCTCGCCCTTTGCTCCGGGCTTGTGAGGCCCTGGGATATGCTAAACCAACCCCAATTCAGGCAGCATGCATTCCATTGGCATTGAGTGGTCGTGATATATGTGGAAGTGCTATTACCGGGTCAGGGAAGACTGCTGCATTTGCACTACCTACGTTAGAGAGGTTGTTGTTCCGTCCAAAGCGCATACCTGCAATAAGGGTCCTCATTCTGACTCCAACCAGAGAGTTGGCAGTCCAAGTACACAGTATGATAGAGAAGCTTGCCCAGTTTACCGATATAAAGTGTTGCCTGGTTGTTGGGGGCCTGTCCACGAAGGTGCAAGAGGCTGCTTTGAGATCAATGCCAGACATTGTTGTGGCTACTCCAGGACGCATGATAGACCATTTACGCAATGCTATGTCTGTGGATTTGGATGATCTTGCTGTTCTAATCCTTGACGAGGCAGATCGTCTTTTGGAGCTTGGATTTAGTGCTGAAATTCAAGAACTTGTTCGCTTGTGTCCAAAAAAAAGGCAGACTATGTTGTTTTCAGCAACAATGACTGAGGAGGTTAATGAACTTATTAAGCTTTCCCTGTCAAAGCCCTTGCGTCTTTCTGCTGATCCATCTACAAAACGGCCAGCAACATTGACTGAGGAGGTTGTTAGAATAAGAAGAATGCGTGAAGTAAATCAGGAAGCAGTTCTTCTTGCAATGTGCTCCAAAACTTTTACGTCCAAAGCCATAATCTTTAGTGGAACAAAGCAAGCTGCACATAGGTTGAAGATTATCTTTGGATTAGCTGGCTTAAAAGCTACTGAGCTTCACGGAAATCTTACTCAAGCCCAGCGCCTTGAAGCTTTGGAACAGTTTAGGAAGCAGCAAGTGGATTTTTTGGTTGCAACAGATGTGGCTGCCCGTGGCCTTGACATTATTGGTGTTCAGACAGTTATCAACTTTGCATGTCCACGTGATCTTACTAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGAAGAGAAGGATATGCTGTCACTTTTGTGACTGACAATGACAGATCACTTTTAAAAGCTATTGCCAAGAGAGCTGGTTCAAAATTGAAAAGCCGCATTGTTGCTGAGCAATCTATACATAAGTGGTCTCAAATAATTGAGCAAATGGAGGATCAAATTGCTGAAGTACTTCAAGAAGAGAGAGAAGAAAGAATCTTAAGGAAAGCTGAAATGGAGGCTACAAAGGCTGAAAACATGATTGCACACAGGGAAGAGATCTTTTCCCGTCCCAAAAGAACCTGGTTTGTCACTGACAAGGAGAAAAAGCTTGCTGCAAAAGCATCAAAGGCATCTGTGGATAAGAACAAGAGTTCTGGGAAAGAAGTAATGAGTGCTGAACAAGCTGAAGACCTAAAAATGAAGGAAAAGAGGAAGAGAGAGCGAGAGAAACATTTGCCTAGGAAGAAACGTAGAAAATTGGAAGCAGCTAGAGAGATGTTGGAGGACGAGGAGGAGGATGGCAAACAAGTAGAGGCTAAGGGGATAAATAAAAAGGAAAAGGGTGGAATGTCACTGGTTGATCTTGCTTACCGACGAGCAAAAGCAGTGAAGGCTGTTAAGAAGGCATTAGATTCTGGCAAGATTGTGAAGAAGAATAATAAGAAATCTAATAATTCTTCCAGAAAAACTCATTCTAGGACAGAAGAGATGCGAGAGCTATTCCAGACTGATATGAAGGATAAAAAGCCAAAAAGAAGGGGTGGTGGAGGAAAGAAGTCAAAGAGTTCATTCAAAAGCAAGTCAAGGTACAAGCGAAAGTAGTCTGCGAGACCTACGAAGGAGACCATAAATCTGCAATGCTTGTCTGACATAGTGCTTATATCTTATCCACTACATTATTGAATGTAATTAAATGAGCTTCCACCAGTGAATTTCAGCTGATGCTTGTGGGTTATTTTTGGGTGGCCATGGTGATGTGGGAAGGGTAACAGTAACTACTACTGCAAATACCCTTTTTTTATGTTAGTTGTATCACGTGAGCATGGTTACCCCAAATGGACAGCATAATTTATAGCTGCTCAATTTTGTAATACTACCATTAAATTGCGTTTATGTTACCAATAGA | 2614 | 0.4338 | MSPSFVFDPPSDEEIEHSEQEEEEESEDEEGSQEGDSASEPDSEGEGEEEGRKEKRVLKKKTQSPWDFAKYTESVAEEHARRSTTSVDEKISKALRQRSTPLVAELDHSSESEPDDEQEDYRPEEEDEEEGNGGDSKSFFAPSDGTSFHADSFLQLNLSRPLLRACEALGYAKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLFRPKRIPAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNAMSVDLDDLAVLILDEADRLLELGFSAEIQELVRLCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSTKRPATLTEEVVRIRRMREVNQEAVLLAMCSKTFTSKAIIFSGTKQAAHRLKIIFGLAGLKATELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIHKWSQIIEQMEDQIAEVLQEEREERILRKAEMEATKAENMIAHREEIFSRPKRTWFVTDKEKKLAAKASKASVDKNKSSGKEVMSAEQAEDLKMKEKRKREREKHLPRKKRRKLEAAREMLEDEEEDGKQVEAKGINKKEKGGMSLVDLAYRRAKAVKAVKKALDSGKIVKKNNKKSNNSSRKTHSRTEEMRELFQTDMKDKKPKRRGGGGKKSKSSFKSKSRYKRK | 756 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste7g01215 | 756 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 182 | 356 | IPR014001 | - | |
Pste7g01215 | 756 | Coils | Coil | 529 | 569 | - | - | |
Pste7g01215 | 756 | Gene3D | - | 112 | 358 | IPR027417 | - | |
Pste7g01215 | 756 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 223 | 511 | IPR027417 | - | |
Pste7g01215 | 756 | Pfam | Helicase conserved C-terminal domain | 388 | 491 | IPR001650 | - | |
Pste7g01215 | 756 | CDD | DEADc_DDX27 | 162 | 357 | - | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 1 | 141 | - | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 691 | 756 | - | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 711 | 734 | - | - | |
Pste7g01215 | 756 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 115 | 713 | - | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 72 | 95 | - | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 595 | 670 | - | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 110 | 132 | - | - | |
Pste7g01215 | 756 | CDD | SF2_C_DEAD | 368 | 500 | - | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 46 | 63 | - | - | |
Pste7g01215 | 756 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 367 | 530 | IPR001650 | - | |
Pste7g01215 | 756 | SMART | helicmild6 | 406 | 491 | IPR001650 | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 642 | 670 | - | - | |
Pste7g01215 | 756 | Gene3D | - | 377 | 615 | IPR027417 | - | |
Pste7g01215 | 756 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 151 | 179 | IPR014014 | GO:0003724 | |
Pste7g01215 | 756 | SMART | ultradead3 | 170 | 371 | IPR014001 | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 14 | 45 | - | - | |
Pste7g01215 | 756 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 302 | 310 | IPR000629 | - | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 735 | 756 | - | - | |
Pste7g01215 | 756 | Coils | Coil | 640 | 663 | - | - | |
Pste7g01215 | 756 | Pfam | DEAD/DEAH box helicase | 175 | 345 | IPR011545 | GO:0003676|GO:0005524 | |
Pste7g01215 | 756 | MobiDBLite | consensus disorder prediction | 595 | 627 | - | - | |
Pste7g01215 | 756 | Coils | Coil | 615 | 635 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste7g01215 | Pste-Chr7 | 11243939 | 11253848 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste7g01215 | 112 | 508 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 33.250 | 2.49e-52 | 186 |