Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01215 CCCTTCCAAAAACCTGCGGCAAATAAAACCACCAAAACAATGTCGCCGAGCTTCGTCTTCGACCCTCCGAGCGACGAAGAAATTGAACACTCTGAGCAAGAAGAAGAAGAAGAATCAGAAGACGAAGAAGGATCACAAGAAGGTGATTCAGCATCAGAACCTGACTCAGAAGGAGAAGGAGAAGAAGAAGGGCGCAAAGAAAAGCGGGTTTTGAAGAAGAAAACACAGTCTCCATGGGACTTCGCTAAGTACACAGAATCTGTTGCCGAGGAACATGCTCGCAGGAGTACAACCTCGGTCGACGAGAAAATCTCCAAAGCACTCAGACAACGTTCTACGCCGCTCGTTGCTGAGCTCGACCATAGCTCCGAATCCGAACCTGATGATGAACAAGAAGATTATAGACCAGAGGAAGAAGATGAAGAAGAGGGTAATGGGGGTGATAGCAAATCCTTTTTTGCTCCTTCTGATGGAACCTCTTTCCATGCTGATTCCTTCTTGCAACTCAATTTGTCTCGCCCTTTGCTCCGGGCTTGTGAGGCCCTGGGATATGCTAAACCAACCCCAATTCAGGCAGCATGCATTCCATTGGCATTGAGTGGTCGTGATATATGTGGAAGTGCTATTACCGGGTCAGGGAAGACTGCTGCATTTGCACTACCTACGTTAGAGAGGTTGTTGTTCCGTCCAAAGCGCATACCTGCAATAAGGGTCCTCATTCTGACTCCAACCAGAGAGTTGGCAGTCCAAGTACACAGTATGATAGAGAAGCTTGCCCAGTTTACCGATATAAAGTGTTGCCTGGTTGTTGGGGGCCTGTCCACGAAGGTGCAAGAGGCTGCTTTGAGATCAATGCCAGACATTGTTGTGGCTACTCCAGGACGCATGATAGACCATTTACGCAATGCTATGTCTGTGGATTTGGATGATCTTGCTGTTCTAATCCTTGACGAGGCAGATCGTCTTTTGGAGCTTGGATTTAGTGCTGAAATTCAAGAACTTGTTCGCTTGTGTCCAAAAAAAAGGCAGACTATGTTGTTTTCAGCAACAATGACTGAGGAGGTTAATGAACTTATTAAGCTTTCCCTGTCAAAGCCCTTGCGTCTTTCTGCTGATCCATCTACAAAACGGCCAGCAACATTGACTGAGGAGGTTGTTAGAATAAGAAGAATGCGTGAAGTAAATCAGGAAGCAGTTCTTCTTGCAATGTGCTCCAAAACTTTTACGTCCAAAGCCATAATCTTTAGTGGAACAAAGCAAGCTGCACATAGGTTGAAGATTATCTTTGGATTAGCTGGCTTAAAAGCTACTGAGCTTCACGGAAATCTTACTCAAGCCCAGCGCCTTGAAGCTTTGGAACAGTTTAGGAAGCAGCAAGTGGATTTTTTGGTTGCAACAGATGTGGCTGCCCGTGGCCTTGACATTATTGGTGTTCAGACAGTTATCAACTTTGCATGTCCACGTGATCTTACTAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGAAGAGAAGGATATGCTGTCACTTTTGTGACTGACAATGACAGATCACTTTTAAAAGCTATTGCCAAGAGAGCTGGTTCAAAATTGAAAAGCCGCATTGTTGCTGAGCAATCTATACATAAGTGGTCTCAAATAATTGAGCAAATGGAGGATCAAATTGCTGAAGTACTTCAAGAAGAGAGAGAAGAAAGAATCTTAAGGAAAGCTGAAATGGAGGCTACAAAGGCTGAAAACATGATTGCACACAGGGAAGAGATCTTTTCCCGTCCCAAAAGAACCTGGTTTGTCACTGACAAGGAGAAAAAGCTTGCTGCAAAAGCATCAAAGGCATCTGTGGATAAGAACAAGAGTTCTGGGAAAGAAGTAATGAGTGCTGAACAAGCTGAAGACCTAAAAATGAAGGAAAAGAGGAAGAGAGAGCGAGAGAAACATTTGCCTAGGAAGAAACGTAGAAAATTGGAAGCAGCTAGAGAGATGTTGGAGGACGAGGAGGAGGATGGCAAACAAGTAGAGGCTAAGGGGATAAATAAAAAGGAAAAGGGTGGAATGTCACTGGTTGATCTTGCTTACCGACGAGCAAAAGCAGTGAAGGCTGTTAAGAAGGCATTAGATTCTGGCAAGATTGTGAAGAAGAATAATAAGAAATCTAATAATTCTTCCAGAAAAACTCATTCTAGGACAGAAGAGATGCGAGAGCTATTCCAGACTGATATGAAGGATAAAAAGCCAAAAAGAAGGGGTGGTGGAGGAAAGAAGTCAAAGAGTTCATTCAAAAGCAAGTCAAGGTACAAGCGAAAGTAGTCTGCGAGACCTACGAAGGAGACCATAAATCTGCAATGCTTGTCTGACATAGTGCTTATATCTTATCCACTACATTATTGAATGTAATTAAATGAGCTTCCACCAGTGAATTTCAGCTGATGCTTGTGGGTTATTTTTGGGTGGCCATGGTGATGTGGGAAGGGTAACAGTAACTACTACTGCAAATACCCTTTTTTTATGTTAGTTGTATCACGTGAGCATGGTTACCCCAAATGGACAGCATAATTTATAGCTGCTCAATTTTGTAATACTACCATTAAATTGCGTTTATGTTACCAATAGA 2614 0.4338 MSPSFVFDPPSDEEIEHSEQEEEEESEDEEGSQEGDSASEPDSEGEGEEEGRKEKRVLKKKTQSPWDFAKYTESVAEEHARRSTTSVDEKISKALRQRSTPLVAELDHSSESEPDDEQEDYRPEEEDEEEGNGGDSKSFFAPSDGTSFHADSFLQLNLSRPLLRACEALGYAKPTPIQAACIPLALSGRDICGSAITGSGKTAAFALPTLERLLFRPKRIPAIRVLILTPTRELAVQVHSMIEKLAQFTDIKCCLVVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNAMSVDLDDLAVLILDEADRLLELGFSAEIQELVRLCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSTKRPATLTEEVVRIRRMREVNQEAVLLAMCSKTFTSKAIIFSGTKQAAHRLKIIFGLAGLKATELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIHKWSQIIEQMEDQIAEVLQEEREERILRKAEMEATKAENMIAHREEIFSRPKRTWFVTDKEKKLAAKASKASVDKNKSSGKEVMSAEQAEDLKMKEKRKREREKHLPRKKRRKLEAAREMLEDEEEDGKQVEAKGINKKEKGGMSLVDLAYRRAKAVKAVKKALDSGKIVKKNNKKSNNSSRKTHSRTEEMRELFQTDMKDKKPKRRGGGGKKSKSSFKSKSRYKRK 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01215 756 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 182 356 IPR014001 -
Pste7g01215 756 Coils Coil 529 569 - -
Pste7g01215 756 Gene3D - 112 358 IPR027417 -
Pste7g01215 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 511 IPR027417 -
Pste7g01215 756 Pfam Helicase conserved C-terminal domain 388 491 IPR001650 -
Pste7g01215 756 CDD DEADc_DDX27 162 357 - -
Pste7g01215 756 MobiDBLite consensus disorder prediction 1 141 - -
Pste7g01215 756 MobiDBLite consensus disorder prediction 691 756 - -
Pste7g01215 756 MobiDBLite consensus disorder prediction 711 734 - -
Pste7g01215 756 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 115 713 - -
Pste7g01215 756 MobiDBLite consensus disorder prediction 72 95 - -
Pste7g01215 756 MobiDBLite consensus disorder prediction 595 670 - -
Pste7g01215 756 MobiDBLite consensus disorder prediction 110 132 - -
Pste7g01215 756 CDD SF2_C_DEAD 368 500 - -
Pste7g01215 756 MobiDBLite consensus disorder prediction 46 63 - -
Pste7g01215 756 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 367 530 IPR001650 -
Pste7g01215 756 SMART helicmild6 406 491 IPR001650 -
Pste7g01215 756 MobiDBLite consensus disorder prediction 642 670 - -
Pste7g01215 756 Gene3D - 377 615 IPR027417 -
Pste7g01215 756 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 151 179 IPR014014 GO:0003724
Pste7g01215 756 SMART ultradead3 170 371 IPR014001 -
Pste7g01215 756 MobiDBLite consensus disorder prediction 14 45 - -
Pste7g01215 756 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 302 310 IPR000629 -
Pste7g01215 756 MobiDBLite consensus disorder prediction 735 756 - -
Pste7g01215 756 Coils Coil 640 663 - -
Pste7g01215 756 Pfam DEAD/DEAH box helicase 175 345 IPR011545 GO:0003676|GO:0005524
Pste7g01215 756 MobiDBLite consensus disorder prediction 595 627 - -
Pste7g01215 756 Coils Coil 615 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01215 Pste-Chr7 11243939 11253848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01215 112 508 Eukaryotic Initiation Factors Gene Family AT3G13920 33.250 2.49e-52 186