Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01183 AGAAGGCCCTCGTCCAATAAGGTTCAACATGATGGTGGTTGATGAAAATAACCGGAACCGCGTGGTTAGAAGGGATATGGTGCAGCTTCCACAATATGATCAAGCTGTAACTGTGGCATATTATGGGGAGGAGTTGCATGGGGGCGTGCCTATACCCTACTCCTCTAGAATGTCACCTTTAAACACGGATAGACAAAACAAGGCGATGGACAATAAATACAAGCCCTTGAACAGTCCCATAAAGCAAGCAACACCAGCTGAGGTTCAGAAGTTTGCAAGTTCCATAAAGGTTGCAACAGAAGGAACATCCTCTCGTGGTCAGGTCATGTCATCTGCTGTTCTTCAAGCAGAGGAGCTCCAATTACATTTGGAACCAGAATTCCCTAGTTTTGTGAAGTCTTTAGTTAGATCACATGTTGCTAGTTGTTTTTGGATGGGGCTGCCTGTATCATTCTGTAAAAGGTACTTACTGGATAAGGATACGGCAATCATTTTGGAAGATGAATCTGGTAAAGAATACATGACAAAATACATTGCATGTAAGACAGGATTGAGTGCTGGTTGGAGACAGTTTTCTGCTGTGCACAAATTGCAGGAGGGTGATGCTGTGGTCTTCCAATTAGTTGAACCTATCAAATTT 640 0.4313 MMVVDENNRNRVVRRDMVQLPQYDQAVTVAYYGEELHGGVPIPYSSRMSPLNTDRQNKAMDNKYKPLNSPIKQATPAEVQKFASSIKVATEGTSSRGQVMSSAVLQAEELQLHLEPEFPSFVKSLVRSHVASCFWMGLPVSFCKRYLLDKDTAIILEDESGKEYMTKYIACKTGLSAGWRQFSAVHKLQEGDAVVFQLVEPIKF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01183 204 Gene3D - 100 204 IPR015300 -
Pste7g01183 204 ProSiteProfiles B3 DNA-binding domain profile. 121 204 IPR003340 GO:0003677
Pste7g01183 204 CDD B3_DNA 119 200 IPR003340 GO:0003677
Pste7g01183 204 Pfam B3 DNA binding domain 121 200 IPR003340 GO:0003677
Pste7g01183 204 SUPERFAMILY DNA-binding pseudobarrel domain 114 202 IPR015300 -
Pste7g01183 204 SMART B3_2 121 204 IPR003340 GO:0003677
Pste7g01183 204 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 90 204 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01183 Pste-Chr7 10846624 10848402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01183 98 204 B3 DNA Binding Superfamily AT5G42700 46.729 4.26e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste7g01183 B3 1e-14 CL0405