Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01165 AACAATGTGGTGGGTTTATACTCTGCAATATTCTGTCATGGTGCAAATAACCTGGTCAAGACAGGAAAGTTATGGCATAATGGAATTGCTTGTAATTGTTGTGGCATGCTTTTTTCTCCCACATGGTGCCACAAGCACAAACCAACTGCTAGCATTTTCTTGGAAGATGGAAGGTCATTGTTAGATTGTCAAAAACAAGCCTTGAATTCTCAACAAAACTTGAGTCCTCATCAAAATGATAGCATTTGTGCTGTTTGTAATTATGGTGGTGGTGAACTAGTGTTATGTGATGGATGTCCTTCTTTATTTCACCTCAATTGTTTAGGTTTAGAGCATGTTCCTGATGGTGATTGGTTTTGTACTACGTGTGTTGCAAAATATGCAAACAATTTAGATGCACACAAGACAAAGCTGAAAATATGGATGTTAGTATGTGAGGGAACATACCATATCACGTACTTAAAAGCTCTAGTATATACCAATATGGGAAAGGAAGAACACCATGTTGATAATGAGAATTGGTTTCGTAATGGTGATTATAAGAAGATGTTTTTCAGTTTGCAGAAGTTGGTGGGAAAAACGATTACTATTGTGAAAAGTGATAGTAGCGGTGAATCTAATCTTATTGGAGATGGTCTGAGTCAAATCCGAAACAAGATGATTATTGATGATCTCTTTGGGAGAGAAATTATGGTTGATGTTGTTTTCAGTAGAAAACTCGATCGGTTGAACGTTTGTGGCTTTTATACAATGATCTTGGAGAAGGATAAA 771 0.3658 NNVVGLYSAIFCHGANNLVKTGKLWHNGIACNCCGMLFSPTWCHKHKPTASIFLEDGRSLLDCQKQALNSQQNLSPHQNDSICAVCNYGGGELVLCDGCPSLFHLNCLGLEHVPDGDWFCTTCVAKYANNLDAHKTKLKIWMLVCEGTYHITYLKALVYTNMGKEEHHVDNENWFRNGDYKKMFFSLQKLVGKTITIVKSDSSGESNLIGDGLSQIRNKMIIDDLFGREIMVDVVFSRKLDRLNVCGFYTMILEKDK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01165 257 PANTHER PHD FINGER PROTEIN 12 12 256 IPR042163 GO:0003714|GO:0045892
Pste7g01165 257 ProSitePatterns Zinc finger PHD-type signature. 83 123 IPR019786 -
Pste7g01165 257 SUPERFAMILY FYVE/PHD zinc finger 77 128 IPR011011 -
Pste7g01165 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 175 IPR013083 -
Pste7g01165 257 SMART PHD_3 82 124 IPR001965 -
Pste7g01165 257 ProSiteProfiles Zinc finger PHD-type profile. 80 126 IPR019787 -
Pste7g01165 257 Pfam Tify domain binding domain 22 67 IPR032308 -
Pste7g01165 257 Pfam PHD-finger 82 125 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01165 Pste-Chr7 10750537 10751391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01165 1 256 PHD Transcription Factor Family AT5G58610 35.505 4.55e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste7g01165 TDBD 6.2e-10 No_clan