Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01163 TTCTAGAACCCACGTCATTAGAAGGGGTTGAGTTGTTCTATTTTCCTTCCGTATATCAAATTTATATACAAGAGTCCTCTGCAAGAATCCAGAACAATATCACCCTCACCCCCCTTTTCTTCTCTCTCTCTCTCTCTCTCTCTTCCTCCAACAGAACCGAGTTATGGTATGTGTCATCTATTTCGCCCAGCTGGTTCTGCTGTGGACCCATGGATTCTGATCGTCCCCGAAACCCTACCTTGTGTCACTCTCGCTTCTTCCTCTTCGGTTTCTATTGCTGGGACTGGGAGTTCTTAACCGCTCTCCTCCTTTTCAGTTCTTCTTCTTAATTCTTCATCAAAATTATACCTTTTTTCTTTTCTTTTCTTTCTTCCGTAATAGTTAAATAATTTGTGGGGTGGATCGGGAAGAAATGTCGCAGCAGCGTTCGACGCCGGCACCGTTTTTGACGAAGACGTATCTGTTGGTCGATGACCCTGCCACCGACGACGTTATTTCGTGGAATGAAAACGGCAGCACTTTTGTCGTTTGGAAACACGCCGATTTCGCCAAAGATTTACTTCCCAAGTACTTCAAACACAACAACTTTTCCAGTTTCGTGCGCCAGCTCAACACCTACCGGAATAGTGGTGATGGTAGTTGCGCCGCCACTGTACAAACCAATCCCACTGTGCTTCACTGTGGGTTCATGACGGATTCCGCGGATCATGGATTCCGAAAAATTGTCCCTGACAAATGGGAATTCGCAAACGAGCATTTCAAGAGAGGACAGAGAGATCTTCTGGCCGATATAAAGCGGCGGAAGACGGTGTCCCAATCACCGGCGACTGGAAAATCCGGCGGAGGAGGAAACATCTCGGCTTCACATTCCGGTGGCGACGATATGGGGTCAACGTCAACGGGGTCGGTGGAGGCTGCAACGACTCAATGTGCTGATTTATCGGGAGAGAACGAGAAATTGAAGAAGGACAACGAGAAATTGAGCAGCGAGTTGGCTCGCGCGAAGAAGCAATGTGAGGAGCTGGTAACGTTTTTGAGGGAGTCTCTGAACGTGTGTCCCAATGTGATAAACTGCATCATTCAGCAAGGAACGTGTGGGTCCAGCTACGATGCGGTGCGTTTTGACGCTACTCATGATGATGACGAAAATGCGGTAGGTGAGTGTGAACAACAACAACAACTCCTCAATGGTGATAATAGCGGTGGAGAAAGTTTGAAGCTGTTCGGAGTTTGGTTGAAGGGTCAAGATGCCAAGGACAAAAAAGACAATCTGACAATTGGTGGTAACTGTCGCAAGAGAGGACGCGAGGACCCAATTGCTGGTACTGCCTCTGCCCAGGAATTGAAGACCCTTGTCTAGGACACATCATAAGAAATTATTATAGTCAGATCTAGAAAACTCTTTTGGTCATCATGGAACATGCATGGCTTTTCATTTTCTTTTATTTTTAGTTTTATATATACAAATACTAGTTGTTGGTTTGGTGGTGGACTAAGTAAATGATACTAATAATGATTATTATGATGTGTATAAACATTAATCAGTATCCTGTTCGAATTTAAGTTTGTTTTCACCTTTTAATTGCTGCATCGTACTCTATTAATTAAGGAATTCGACACATAAATTCCTGGTCTTACATTATTGTGTGGAACAGGATCATTGTACATTTGTATTGCGTCATTTGACTAGTTCCAATTATGAATCAGGTATGCTTGCTGGC 1721 0.4428 MSQQRSTPAPFLTKTYLLVDDPATDDVISWNENGSTFVVWKHADFAKDLLPKYFKHNNFSSFVRQLNTYRNSGDGSCAATVQTNPTVLHCGFMTDSADHGFRKIVPDKWEFANEHFKRGQRDLLADIKRRKTVSQSPATGKSGGGGNISASHSGGDDMGSTSTGSVEAATTQCADLSGENEKLKKDNEKLSSELARAKKQCEELVTFLRESLNVCPNVINCIIQQGTCGSSYDAVRFDATHDDDENAVGECEQQQQLLNGDNSGGESLKLFGVWLKGQDAKDKKDNLTIGGNCRKRGREDPIAGTASAQELKTLV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01163 315 FunFam Heat stress transcription factor B-4 3 73 - -
Pste7g01163 315 Gene3D - 169 210 - -
Pste7g01163 315 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 229 IPR027725 -
Pste7g01163 315 MobiDBLite consensus disorder prediction 132 169 - -
Pste7g01163 315 SMART hsfneu3 7 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g01163 315 MobiDBLite consensus disorder prediction 130 169 - -
Pste7g01163 315 Pfam HSF-type DNA-binding 11 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g01163 315 SUPERFAMILY "Winged helix" DNA-binding domain 7 130 IPR036390 -
Pste7g01163 315 Coils Coil 166 200 - -
Pste7g01163 315 Gene3D - 3 132 IPR036388 -
Pste7g01163 315 PRINTS Heat shock factor (HSF) domain signature 49 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g01163 315 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g01163 315 PRINTS Heat shock factor (HSF) domain signature 11 34 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01163 Pste-Chr7 10733132 10736616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01163 4 292 HSF AT4G36990 49.169 8.04e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste7g01163 HSF_DNA-bind 1.6e-29 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01163 7 10733132 10736616 Pste7g01163 7 10733132 10736616 ECH
Pste1g02406 1 8496392 8498984 Pste7g01163 7 10733132 10736616 PCT