Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01141 ATGGATGTGGACATAGTGAAATCTTCCGCGTGTGACACCAGCAACATGGACGTGATGGCCATGATGATGCAAATGGAAAAGTTCCCTGATTTCTATGACCCTTTTTATACACCCTCTTACCAAGAAACCGACTTGTTGTCAAGTGGAAGCTCCTCAAACAGCGTTTCCACCGTATTCAAAACCGTAGCCCCACCCTCTCTCATCGACCCAACACCGTCAAATTTTGTCAATTTTTCCAACAACAACAACAACAACAACCTTATCCAACAACAGCAACCTATGACAGCTTCCCTTCAACCGCCGCAATCCAGTTCCTTCCCCTACCCTTCTGAGAAAAAGAACTCCATGGCGGCAATGAGGGAAATGATATTCCGAATAGCGGTTATGCAACCGATTCACATAGACCCTGAATCGATAAAGCCACCGAAGCGACGCAACGTGAAGATTTCAAAGGATCCACAAAGCGTGGCGGCGAGGCACAGAAGGGAAAGAATAAGCGAGAGGATAAGGATTCTGCAGAGATTAGTCCCTGGTGGCACCAAAATGGACACGGCTTCGATGTTGGATGAGGCCATTCACTACGTCAAGTTCTTGAAGAAACAGGTGCAGACGCTGGAACAAGCAGGTGCAAATAGACCAATCAATGGTCCCAATCCCGTTGGTGCTGTCGGTTTCCCTCTAGGGATGTCTAACTCTAATAATGTTAGTTATTCTTCTCTGTTGATGAAGGGTTGCCAACCTTGTCAAGTGTTCGGTTCCACTTCTAAACAATTACTCAGCTAA 783 0.4636 MDVDIVKSSACDTSNMDVMAMMMQMEKFPDFYDPFYTPSYQETDLLSSGSSSNSVSTVFKTVAPPSLIDPTPSNFVNFSNNNNNNNLIQQQQPMTASLQPPQSSSFPYPSEKKNSMAAMREMIFRIAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGANRPINGPNPVGAVGFPLGMSNSNNVSYSSLLMKGCQPCQVFGSTSKQLLS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01141 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 207 IPR036638 GO:0046983
Pste7g01141 260 Pfam Helix-loop-helix DNA-binding domain 159 198 IPR011598 GO:0046983
Pste7g01141 260 Coils Coil 188 208 - -
Pste7g01141 260 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 37 250 IPR045843 GO:0003700|GO:0006355
Pste7g01141 260 FunFam BHLH transcription factor 152 215 - -
Pste7g01141 260 SMART finulus 155 204 IPR011598 GO:0046983
Pste7g01141 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
Pste7g01141 260 Gene3D - 148 213 IPR036638 GO:0046983
Pste7g01141 260 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01141 Pste-Chr7 10536267 10537049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01141 12 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 51.121 1.83e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g01141 HLH 1.7e-06 No_clan