Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01133 AAGAAGAACAAGTTATTAATTTTGATGTGCTTGTCTTTCTTCCCTCCAATCATTTTCCTCTGTGTCTTGTTTTCTTTTCTCTCTCTGATTTTCCGGGAAAATTTCTCTCACTCTTGCTCTCTGAGGAGGAAGCAGAAGAGTAGAAGGAAGACATTTCTCTGCTTCTACGGAAACTCTTCCCTTCACTTCCTTCCCTTTCTCTTCTCAATTTCCCATCACAGTTTTCTTCACTCCTCAATTTCAATCCTCCATGAACCCCCTCTAGCCCCTCCCCTCCTTCCTTCTCTTCTTCAAGGTGCACCTGAGATTTCCCCACTTAATGTTCCAAAAAAGGTGGGAAGCAGTGCATGGGGAATACCACGTGCCGCCGATATGTTCCATGACTCAATAGATTTGACCGATGCTGAAAATCCAGTTGATGATAACTCGCTAACATTAGATAAAGTTCACAAAGAAGATGAGGAGCACGATCCTTTTGATGATTTTGAAACCAACGCAATTGGGAACATTCTTCCCGATGATGAGGAGGAGCTTTTAGCTGGGATTATGGATGATTTTGACCTCAGTAAATTGCCCAGCCAACTGGAGGATTTGGATGAAAATGATCTATTTGTCAATGGAGGGGGATTTGAGATGGATTTTGAACCCCAAGAGAGCCTCAGTATTGGCATGTCCAAGATAAGCATATCTGACGGAGTAGCTTCAAATGGTATTGGTCATTATGCAATCGCAAATGGTGTGGGAACAGTGGCTGGGGAGCATCCCTATGGAGAGCATCCATCAAGGACATTATTTGTTCGAAACATCAACAGTAATGTTGAAGACTCTGAATTACGAACGCTATTTGAGCAATACGGGGATATCAGAACTTTGTACACTGCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTATGACATTCGAGCTGCTCGCACTGCCATGCGTGCTCTACAAAACAAGCCTTTGAGACGCAGAAAACTTGATATTCATTTTTCAATTCCTAAGGATAACCCCTCTGAAAAAGATATTAATCAAGGAACCCTTGTAGTGTTCAATTTAGATCCGTCAGTATCAAATGATGACCTTCGACAAATATTTGGGGCTTATGGTGAGGTCAAGGAGATCAGGGAAACCCCTCATAAGAGACACCATAAATTTATTGAATTTTATGATGTTAGAGCAGCTGAGGCAGCTCTTAAAGCATTAAATCGAAGTGATATTGCTGGGAAACGCATAAAACTTGAACCCAGTCGCCCTGGTGGAGCACGTAGAAATGGCACATTTTGTCTTGCTAGCTTGATGCAACAACTGAGTCAAGAACTGGAACAGGATGAAGCTCGAACTTTTAGACATCAAGTAGGTTCACCAGTAGCCAATTCTCCTCCTGGTAGCTGGGCTCAATTTGGCAGTCCAGTTGAACATAATCCATTAGGTTCTTTTAGCAAGTCCCCCGGTTTGGGTCATGCCAGTCCCATTAGTACCAACCATTTGTCTGGATTGGCTGCAATTCTTTCCCCACATGCAACAACCTCTAGCAAGATTGCACCAATTGGCAAGGACCCTGGAAGGGCAAATCAAATGTTTGCAAATTCTGGATCAACACAAGGAGCAGCTTTTCAGCACTCTATATCCTTTCCTGAACAAAATGTAAATGCAAGTTCCAGGCCTATATCTACTTTTGGTGAATCAAGTTCAAGTGCATCAAGTATTGGAACATTGTCAGGTCCTCAATTTCTTTGGGGAAGTCCAACTCCTTACTCTGAGCGTTCAAGCACTTCTGCCTGGTCTTCATCTTCTGTGGGGCGTCCATTTACATCTAGTGTGCAGAGGCAGGGCTTCCCATACACTAGTCATCGAAGTCCTTTTCTTGGCTCCCACTCCCATCATCATGTTGGATCTGCTCCATCTGGCCTTCCACTTGACAAGCATTTTAGCTACTTCCCTGAGTCACCTGAAGCTTCTCTCATGAACCCAGCTGCATTTGGGAATTTAAATCACAGTGATGGAAACTTTATGATGAACATGGGTACTCGGGCATCTGTAGGAGCTGGAGTTGGCCTTTCAGGAAATACCACCGAAATTGGTTCTCCTAATTTCAGGATGATGTCACTGCCTAGGTATAGTTCCTTGTTCCATGGAAATAGTTCATATTCTGGACCAGGGATAACTAGCATCGAGGGATTAGCTGATCGTGGACGAAGTAGACGACCTGACAATGGCGGGAACCAAATTGATAGTAAGAAACTGTACCAGCTTGATCTTGACAAAATTGTCAGCGGTGAAGATACAAGGACTACTTTAATGATTAAAAACATTCCTAACAAGTATACATCGAAGATGCTACTTGCTGCAATTGACGAGAATCATAGGGGTACCTATGACTTTCTCTACTTGCCAATTGACTTTAAGAATAAGTGTAATGTGGGTTATGCTTTTATCAATATGGTGTCTCCATCACACATCATTGCCTTCTATAAGGCCTTTAATGGGAAAAAGTGGGAGAAGTTCAATAGTGAAAAGGTTGCTTCACTGGCATATGCACGGATACAAGGTAAGGCTGCACTTGTGATGCATTTCCAGAATTCAAGCTTAATGAATGAGGACAAACGATGCCGGCCAATTCTCTTTCATTCGGAGGGCCAAGATACTGGTGACCAGGAACATTTTCTATCCAGCAATTTGAACATATGCATACGTCAACCAGATGGATCCTATTCAGGTGATTTGTTGGAGAGCCCGAAGGGCAATTCAGATCAGAAGCTAGAAAAAGATTAA 2778 0.4284 KKNKLLILMCLSFFPPIIFLCVLFSFLSLIFRENFSHSCSLRRKQKSRRKTFLCFYGNSSLHFLPFLFSISHHSFLHSSISILHEPPLAPPLLPSLLQGAPEISPLNVPKKVGSSAWGIPRAADMFHDSIDLTDAENPVDDNSLTLDKVHKEDEEHDPFDDFETNAIGNILPDDEEELLAGIMDDFDLSKLPSQLEDLDENDLFVNGGGFEMDFEPQESLSIGMSKISISDGVASNGIGHYAIANGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNGTFCLASLMQQLSQELEQDEARTFRHQVGSPVANSPPGSWAQFGSPVEHNPLGSFSKSPGLGHASPISTNHLSGLAAILSPHATTSSKIAPIGKDPGRANQMFANSGSTQGAAFQHSISFPEQNVNASSRPISTFGESSSSASSIGTLSGPQFLWGSPTPYSERSSTSAWSSSSVGRPFTSSVQRQGFPYTSHRSPFLGSHSHHHVGSAPSGLPLDKHFSYFPESPEASLMNPAAFGNLNHSDGNFMMNMGTRASVGAGVGLSGNTTEIGSPNFRMMSLPRYSSLFHGNSSYSGPGITSIEGLADRGRSRRPDNGGNQIDSKKLYQLDLDKIVSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIIAFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTGDQEHFLSSNLNICIRQPDGSYSGDLLESPKGNSDQKLEKD 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01133 925 SMART rrm1_1 348 416 IPR000504 GO:0003723
Pste7g01133 925 SMART rrm1_1 263 331 IPR000504 GO:0003723
Pste7g01133 925 SMART rrm1_1 767 843 IPR000504 GO:0003723
Pste7g01133 925 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 262 335 IPR000504 GO:0003723
Pste7g01133 925 MobiDBLite consensus disorder prediction 906 925 - -
Pste7g01133 925 FunFam MEI2-like protein 5 isoform 2 251 345 - -
Pste7g01133 925 SUPERFAMILY RNA-binding domain, RBD 767 852 IPR035979 GO:0003676
Pste7g01133 925 Gene3D - 250 345 IPR012677 -
Pste7g01133 925 Pfam RNA recognition motif 2 765 861 IPR007201 -
Pste7g01133 925 CDD RRM3_MEI2_like 768 853 IPR034454 -
Pste7g01133 925 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 347 420 IPR000504 GO:0003723
Pste7g01133 925 PANTHER RNA RECOGNITION MOTIF-CONTAINING 164 894 - -
Pste7g01133 925 CDD RRM2_MEI2_like 346 416 - -
Pste7g01133 925 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 349 414 IPR000504 GO:0003723
Pste7g01133 925 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 264 328 IPR000504 GO:0003723
Pste7g01133 925 SUPERFAMILY RNA-binding domain, RBD 259 422 IPR035979 GO:0003676
Pste7g01133 925 FunFam Protein MEI2-like 1 346 448 - -
Pste7g01133 925 Gene3D - 346 429 IPR012677 -
Pste7g01133 925 CDD RRM1_MEI2_like 261 337 IPR034453 -
Pste7g01133 925 Gene3D - 759 854 IPR012677 -
Pste7g01133 925 MobiDBLite consensus disorder prediction 723 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01133 Pste-Chr7 10450887 10459367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01133 257 417 Eukaryotic Initiation Factors Gene Family AT1G71770 25.405 7.32e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01133 7 10450887 10459367 Pste7g01133 7 10450887 10459367 ECH