Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01093 ATGGTCACCTTCAGGTTTCACCAGTACCAGGTTGTGGGGAGAGCACTTCCTACTGAAACTGATGTGCATCCTAAGATCTACAGGATGAAGTTGTGGGCCAACAATGAGGTCCGTGCCAAATCTAAGTTCTGGTACTTCTTGAGAAAGCTAAAGAAGGTCAAGAAAAGCAATGGCCAAATGTTAGCCATCAATGAGGCATGCATTCTCAATTGCAGGATTTTTGAGAAAAATCCTACCAAGATAAAGAACTATGGAATTTGGCTGCGATATCAGAGTCGAACTGGTTATCACAACATGTACAAGGAATACCGCGATACTACTCTAAACGGCGCCGTCGAACAAATGTACAATGAAATGGCATCTCGCCATAGAGTCAGGTTTCCATGCATCCAGATCATCAAGACTGCCACCATTCCAGCTAAACTTTGCAAAAGGGAGAGCACCAAGCAGTTCCACGACTCCAAAATCAAGTTTCCATTGGTGTTCAAGAAGGTTAGGCCCCCAACTAGGAAGCTCAAAACAACATACAAGGCATCCAAACCCAATCTGTTTATGTAA 558 0.4373 MVTFRFHQYQVVGRALPTETDVHPKIYRMKLWANNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEACILNCRIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01093 185 Gene3D - 79 154 - -
Pste7g01093 185 FunFam 60S ribosomal protein L18a 1 78 - -
Pste7g01093 185 PIRSF Ribosomal_L18a 1 185 IPR021138 GO:0003735|GO:0005840|GO:0006412
Pste7g01093 185 PANTHER 60S RIBOSOMAL PROTEIN L18A 3 184 IPR028877 -
Pste7g01093 185 Hamap 50S ribosomal protein L18Ae [rpl18a]. 6 76 IPR028877 -
Pste7g01093 185 FunFam 60S ribosomal protein L18a 79 154 - -
Pste7g01093 185 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 7 135 IPR023573 GO:0003735|GO:0005840|GO:0006412
Pste7g01093 185 SUPERFAMILY RplX-like 78 153 - -
Pste7g01093 185 Gene3D - 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01093 Pste-Chr7 10038189 10040626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01093 1 185 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 88.649 8.86e-122 341