Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01090 ATGAAGATTCACCCTCTGCCTCGAGGAAAGAGAGAGATGATGGAAGAAGAAGGAAGCACGGGAAAGAGAGTGAAGAAAGAGGGTGAGACCACGCGCTACAAAGGAATCAGGATGAGAAAGTGGGGCAAGTGGGTCGCTGAGATTCGAGAACCCAACAAGCGTTCCAGGATTTGGCTCGGTTCTTATTCCACTCCCGTCGCCGCCGCCCGTGCTTACGACACCGCCGTCTTCTATCTCCGGGGACCCTCCGCTCGCCTCAACTTCCCCGACCTTCTCGCCCTCGAGCCCCCCTCCGCCGCCGCTTCCCACATGTCCGCCGCCCTCATCAGGAAGAAGGCCACCGAGGTCGGCGCCAGAGTCGACGCCCTCCACCGCCAACACCCTCCCCCTCCCCCCGCCGCCGCCGATCGTGTCGACCTCAATAAGACCCCCGAACCCGACAATTCCGATTGTTGTGACTGGGACGCTGATTAG 474 0.6076 MKIHPLPRGKREMMEEEGSTGKRVKKEGETTRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLALEPPSAAASHMSAALIRKKATEVGARVDALHRQHPPPPPAAADRVDLNKTPEPDNSDCCDWDAD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01090 157 CDD AP2 31 91 IPR001471 GO:0003700|GO:0006355
Pste7g01090 157 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 150 - -
Pste7g01090 157 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Pste7g01090 157 MobiDBLite consensus disorder prediction 1 27 - -
Pste7g01090 157 FunFam Ethylene-responsive transcription factor 2 31 90 - -
Pste7g01090 157 PRINTS Ethylene responsive element binding protein signature 71 91 IPR001471 GO:0003700|GO:0006355
Pste7g01090 157 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Pste7g01090 157 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
Pste7g01090 157 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Pste7g01090 157 MobiDBLite consensus disorder prediction 118 157 - -
Pste7g01090 157 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Pste7g01090 157 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01090 Pste-Chr7 10024236 10024709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01090 33 153 AP2-EREBP Transcription Factor Family AT2G23340 59.859 2.73e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste7g01090 AP2 3.6e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01090 7 10024236 10024709 Pste7g01090 7 10024236 10024709 ECH
Pste1g02289 1 7854035 7854553 Pste7g01090 7 10024236 10024709 PCT