Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01079 ATTGGTTTTAAAAAGTATCTTGGTTAATTTGGTTGGAACTTGGAAACAAGTATTATTGCAAATCATAGAACAAGAAAAAAATATGAATGCTAAGGTTCATAGCTCAGATAATGATGATACCAAGAAGGATGAAGAAGTTGTGCTTCCTGGCTTTAGGTTCCACCCTACAGATGAAGAGCTTGTTGGGTTTTATCTCCAGAGAAAGGTGGACAAGAAGCCTCTTAGAATTGAACTCATCAAACAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGGTGAATTCATATGGGGAGAAAGAGTGGTATTTTTTCTGCATAAGAGGGAGGAAGTACAGGAACAGTGTGAGGCCAAACAGGGTGACAAGGTCAGGGTTCTGGAAAGCCACAGGGATAGACAAGTCCATATATTGTGTAAAAGAACCACATGAATGCATTGGCCTTAAGAAGTCTTTGGAGGTATGGACACTCTGCAGGATATTCAAACGAACCCCATCTTTCAAAAAGTACACTCCAAATTTGAAAGACTCAGCACCACAAACCAAACCAAACCCTGTGAATTCCAACACATCCACCTTAGATTCTTCTGAGAACTGCAAATCATATTTGATTTGCAGAGACACTATGGTGCAACAAATAGAAAGAAAACCACTTATTGGACCCAATATTGATGAAAAGACACACTTATTTCTGAGCCAGTTTGGCCCACTACCCCATCTTCAGGCCCCATCAACCCCTTACCCTAATTTTTGGAACCACAATACTAATAATAATAATGTTGAGGACTATGCTTTTGCCAATGAGAATTGGGATGACCTAAGATCTGTGGTTCAGTTTGCAATTGATCCAACCTCAGTGTTTGATTGTACAGAAACATATACTCCTCCCTTCTTTTCTTAGGTTGGAGTCAGTCACTTTGATTGGTAGATATGTTTTATATGTTGTATTTGTATGAACATATATAGAGGCTATAGTTGTCATTATTCTCTCACCCTTTTTTAATTTCTTATATGTTGAACTTTGCTGGTTTTACTATGTTTAGTTGTAAAACCTAATATTGACTTGTATCTTGTCATTTATATCCCTTTTCCATTGATTGAGTCAATAAAT 1114 0.3725 MNAKVHSSDNDDTKKDEEVVLPGFRFHPTDEELVGFYLQRKVDKKPLRIELIKQVDIYKYDPWDLPKVNSYGEKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECIGLKKSLEVWTLCRIFKRTPSFKKYTPNLKDSAPQTKPNPVNSNTSTLDSSENCKSYLICRDTMVQQIERKPLIGPNIDEKTHLFLSQFGPLPHLQAPSTPYPNFWNHNTNNNNVEDYAFANENWDDLRSVVQFAIDPTSVFDCTETYTPPFFS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01079 273 Gene3D NAC domain 29 128 IPR036093 GO:0003677|GO:0006355
Pste7g01079 273 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 126 - -
Pste7g01079 273 SUPERFAMILY NAC domain 16 136 IPR036093 GO:0003677|GO:0006355
Pste7g01079 273 ProSiteProfiles NAC domain profile. 20 184 IPR003441 GO:0003677|GO:0006355
Pste7g01079 273 MobiDBLite consensus disorder prediction 146 169 - -
Pste7g01079 273 Pfam No apical meristem (NAM) protein 22 127 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01079 Pste-Chr7 9909982 9916847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01079 9 126 NAC Transcription Factor Family AT1G26870 71.186 1.44e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste7g01079 NAM 1.9e-26 No_clan