Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01058 CACCGCAAAGGTGACACCTTTACAGTGTCTTACCTCATCAATTCATGTGGGGTGTCCCCAACACTGGCCAGGGAACTCTCCAAAAGGGTTTATTTGAAAACCGCAGATGGCCCAAATGCTGTTCTGGATCTTCTCCACAACTATGGGTTCTCCAAACCCCAGGTCGCAAAACTTGTGCAGAAACGTCCCACAGTGCTTATTGCAAATGCAAAGAATTGCCTTTTGCCTAAATTCGAGTTCTTCCGTTCTGTTGGGGTATCCAACTATTACATGCCTAAGATACTACTTGGTAACTACACAATCTTGATAAGAAGCTTGGGAAATTTCCTCATTCCAAGATATGAGATCCTCAGGAGTGTACTCCATGATGATGAGCAAGTTGTTAGAGCTTTGATATCTAACCCATTTGGTTTTACATATGGTCCTGTGCAGCACTTGGTTCCAAACATTGAGGTTTTGAGGCAATGTGGTGTGCCCCAAGCTTCCATCTCTTTCCTGATGATCCATTCTGGGACTCTAGCCTCTGCAAAGCATTCAAGATTTGTGCAAGCTGTCAACACTGCTAAAGAATTTGGGTTTAATCCTTTGAGAATAAATTTTATCATGGCCATTGAAATGTTTCTGACTAAGAACAAAGGAGTATGGGAATCAAGGTTTGAGGTTTATGAGAGGTGGGGCTGGAACCGCGAAATGGCTCTTCGAGCATTTAGGAAGTTTCCCATGATTTTAAAGTTGTCAGAGAAGATGTTTACGAAGAAAATGAATTTCCTTGTGAAGGATATGGGTTGGCCATCAGAAGTTATTGCTGAGTATCCTCAAGTTGTAGCATACAACTTAGAGAAGAGGATTATCCCTAGATTTTCAGTAATCAAAATCTTGAAATCAAAAGGGCTGATTGAGAATAATGTATCTTTTAGCTCTATTATTTGCATAACTGACATAAAATTTGTGGAGAATTTCGTGGCCCATTTTCAGAAAGATCTGCCTGTCTTATCAGATGTCTATAGAGGTGTGGTCAATCCTTCAGATGTAATAGGATCATTGCAGTTTGACTTGGCCTTGGCGGTGCAAATGTTGTGGCAAAGTATGGAATGTGCAGTTGCTTTAAAAACATTTAGGGTAGAGTTTGTCATTCAAACCGGTCTTATAAACTTGAGTAGGATTATTTTCCAAATATATTTGGGGATTGTT 1191 0.4039 HRKGDTFTVSYLINSCGVSPTLARELSKRVYLKTADGPNAVLDLLHNYGFSKPQVAKLVQKRPTVLIANAKNCLLPKFEFFRSVGVSNYYMPKILLGNYTILIRSLGNFLIPRYEILRSVLHDDEQVVRALISNPFGFTYGPVQHLVPNIEVLRQCGVPQASISFLMIHSGTLASAKHSRFVQAVNTAKEFGFNPLRINFIMAIEMFLTKNKGVWESRFEVYERWGWNREMALRAFRKFPMILKLSEKMFTKKMNFLVKDMGWPSEVIAEYPQVVAYNLEKRIIPRFSVIKILKSKGLIENNVSFSSIICITDIKFVENFVAHFQKDLPVLSDVYRGVVNPSDVIGSLQFDLALAVQMLWQSMECAVALKTFRVEFVIQTGLINLSRIIFQIYLGIV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01058 397 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Pste7g01058 397 SMART mt_12 56 87 IPR003690 GO:0003690|GO:0006355
Pste7g01058 397 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Pste7g01058 397 SMART mt_12 265 299 IPR003690 GO:0003690|GO:0006355
Pste7g01058 397 SMART mt_12 92 124 IPR003690 GO:0003690|GO:0006355
Pste7g01058 397 FunFam Mitochondrial transcription termination factor-like 106 328 - -
Pste7g01058 397 Gene3D Transcription termination factor 3, mitochondrial 110 328 IPR038538 -
Pste7g01058 397 PANTHER CGI-12 PROTEIN-RELATED 6 323 IPR003690 GO:0003690|GO:0006355
Pste7g01058 397 Pfam mTERF 42 248 IPR003690 GO:0003690|GO:0006355
Pste7g01058 397 Pfam mTERF 216 316 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01058 Pste-Chr7 9686255 9689481 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste7g01058 mTERF 4.7e-20 No_clan