Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01049 ATGGTTCCTAATTTTCTTCTCATTGCAAGATTCACTTCATCAGCATCATCTTTCGCACGCTACAACACTACCCATTTTCAATTGGGTTTACATTCTCTAAATGCTTCACTTTTTTCATGTAAGTTTTTCACTTCTGATAGAAACCACCACAAAGGTGACACCTTTACGGTGTCTTACCTCATCGATTCATGTGGGTTGTCCCCAACACTGGCCAGCGAACTCTCCAATAGGGTCAAGTTGAAAACCCCAGATGGCCCAAATGCTGTTCTTGATCTTCTCCACAACTATGGGTTCTCCGAAACCCAAGTTGCAAGACTTGTGGAGAAACGTCCCGTGGTGCTTGTTACAAAGGCACAACGTACCCTTTTGCCTAAACTCAAGTTCCTCCGTTCTATTGGGTTTTCCAACATTGACATACCTAAGATCCTTCTTCGTAACCATGTTATCTTGGGTAGCAGCTTGGAAAATCGCCTCATCCCTCATTATCAGATCCTCCGAGGAATAATTCAAGATGATCATAATGTTGTTAGAGCTTTGAGAAATGCCCCCTATAGTTTTAGTTCTTCTTACTTGAAGTTGAAGATGAACTTGACTTCAAACATTGAGGTTTTGAGGCAATCTGGTGTGCCTCAATCTTCCATCACTTGCCTCGTGATCCATTACCCTGCTGTAGCATATACGAAGCATTTCAAATTTTTGGAAGCTGTTGAGACGGTTAAGGAAATTGGGATTGATCCTTTGAAAACGAACTTTGTCGTCGGTGTCCAGGTGCTTTCAACTATGAGAAAAATAGTGTGGAAGTCCAGACTCGAGCTTTATGAGAGGTGGGGCTGGAACAGGGAAATGTTTCTTAAAGCATTTAGAACGTATTCCAATTTTGTGAAGTTGTCAGATAAGTTGTTTACCAAAAAAATGAGTTTCCTAGTAAAGGATATGGGTTTGTCACCAGAAGATATTGCTAATTGTCCTGTGGTTCTGGCCTACAGCTTTGAGAAGAGGATGATCCCTAGATTCTCTGTAATTAAAATCTTGAAATCAAAAGGTTTTGTTAGGAATAGTTTTCATTTTAGTACCTTCATGACCCAAAATGAGGAAACCTTTTTGGAGAAATATGTTGTCAACTTTAAGAAACATTTGCCTCTTTTAGATGATGTCTACAAAGTTCCCAGTGAGGAGGCATCAAAAAGAACTGTCACAAATGAGAAAGCATTCAAAAGATGGGGCGGAAAAAGTCCATTCCAGAGATACGGTCTTCCTATGATCTCTCTCACTGTCCTTGGCTCTATTGGCCTTGCCCAACTCTTACAAGGCAGCAAGGATATTGCAAAGGTGAAAGATGATCAAGAGTGGGATATCATTGAAACAAAAAGAGCATTGTCTAGGACAGGACCAGTGAATGCATACAATCCAAAAAAGATTTCCTTGGAGGATGAGCTAAAGCTTTACAACAAAAGGTGGACATTAACAAATACGAGTACAAGAAAATTCCTAAACCAAATGAAGGCAATCGAGACTAGACTAGAGTTGTGGAGTGTAGAGAACTTTGTCAGAATTTCTCATGTATCATGCTCAAAATCAACTTTTATGGTATCAACAGTCAATTCCCATCTTGCAAGTGAAGTTGTTATTGCCCTGCATCTTTAG 1644 0.4002 MVPNFLLIARFTSSASSFARYNTTHFQLGLHSLNASLFSCKFFTSDRNHHKGDTFTVSYLIDSCGLSPTLASELSNRVKLKTPDGPNAVLDLLHNYGFSETQVARLVEKRPVVLVTKAQRTLLPKLKFLRSIGFSNIDIPKILLRNHVILGSSLENRLIPHYQILRGIIQDDHNVVRALRNAPYSFSSSYLKLKMNLTSNIEVLRQSGVPQSSITCLVIHYPAVAYTKHFKFLEAVETVKEIGIDPLKTNFVVGVQVLSTMRKIVWKSRLELYERWGWNREMFLKAFRTYSNFVKLSDKLFTKKMSFLVKDMGLSPEDIANCPVVLAYSFEKRMIPRFSVIKILKSKGFVRNSFHFSTFMTQNEETFLEKYVVNFKKHLPLLDDVYKVPSEEASKRTVTNEKAFKRWGGKSPFQRYGLPMISLTVLGSIGLAQLLQGSKDIAKVKDDQEWDIIETKRALSRTGPVNAYNPKKISLEDELKLYNKRWTLTNTSTRKFLNQMKAIETRLELWSVENFVRISHVSCSKSTFMVSTVNSHLASEVVIALHL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01049 547 Gene3D Transcription termination factor 3, mitochondrial 171 379 IPR038538 -
Pste7g01049 547 SMART mt_12 176 210 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 SMART mt_12 215 245 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 SMART mt_12 316 350 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 Pfam Cytochrome c oxidase assembly protein COX16 415 480 IPR020164 GO:0031966
Pste7g01049 547 PANTHER CGI-12 PROTEIN-RELATED 54 373 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 Pfam mTERF 266 368 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 Pfam mTERF 90 245 IPR003690 GO:0003690|GO:0006355
Pste7g01049 547 FunFam Mitochondrial transcription termination factor-like 154 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01049 Pste-Chr7 9603314 9608667 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste7g01049 mTERF 3e-19 No_clan