Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01046 GCGTTGTGCCCTCAGCAATTGCTTTGCAAAGAAAAGAAAGTTGATGCAGCATTCAAACGCAAACCCTTGGATTTACTCACATGTTATGCCTATGGCATGAACATTTTAACTGAGACAGTTGAGTGGAGCATTGAAATCTGTAAATTCACTTCATCAGCATCATCTTTCGCACGCTACAACACTACCCATTTTCAATTGGGTTCACATTCTCTAAATGCTTTACTTTTTTCACGTAAGTTTTTCACTTCTGATAGAAACCACCACAAAGGTGACACCTTTACGGTGTCTTACCTCATCGATTCATGTGGGTTGTCCCCAACACTGGCCAGGGAACTCTCCAATAGGGTCAAGTTGAAAACCCCAGATGGCCCAAATGCTGTTCTTGATCTTCTCCACAACTATGGGTTCTCCGAAACCCAAGTTGCAAGACTTGTGGAGAAACGTCCCGTGGTGCTTGTTACAAAGGCACAACGTACCCTTTTGCCTAAACTCAAGTTCCTCCGTTCTATTGGGTTTTCCAACATTGACATACCTAAGATCCTTCTTCGTAACCATGTTATCTTGGGTAGCAGCTTGGAAAATCGCCTCATCCCTCATTATGAGATCCTCCGAGGAATAGTTCAAGATGACCATAATGTTGTTAGAGCCTTGAGAAATGCCCCCGCCAATTTTAGTTCTTCTTACTTGAAGTTGAAGATGGACTTGACTTTAAACATTGAGGTTTTGAGGCAATCCGGTGTGCCTCAATCTTCCATCACTTTCCTCATGATCCATTACCCTACTGCAGCATATGCTAAGCATTTCAAATTTTTGGAAGCTGTTGAGACGATTAAGGAAATTGGGATTGATCCTTTGAAAACGAACTTTGTCGTCGGTGTCCAGGTGCTTTCAACTATGAGAAAAATAGTGTGGAAGTCCAGACTTGAGCTTTATGAGAGGTGGGGTTGGAACAGGGAAATGTTTCTTAAAGCATTTAGAATGTATTCCAATTTTGTGAAGTTGTCAGATAAGTTGTTTACCAAAAAAATGAGTTTCCTAGTGAAGGATATGGGTTTGTCACCAGAAAATATTGCTGATTTTCCTGTGGTTCTGACCTACAGCTTGGAGAAGAGGATGATCCCTAGATTCTCCGTTATTAAAATCTTGAAATCAAAAGGTTTGCTCAGGAATAGTGCTCACTTCACCTTCATGACCCAAGATGAGGAGACGTTTTTGGAGAAATATGTCGTCAACTTTAAGAAACACTTACCTCTTTTAGCTGATGTCTACAAAGGCACCTCTTCTGATTCTGACTCAGATGCAAACCACCATAAAGGTGACAACTTTACCGTCTCTTACCTCATCAACCCATGTGGGGTGTCCCCAAAAAAGGCCAGAGAACTCTCTAAAAGGCTCAATTTGCAAAACCCAGATGGCCCAAATGCTGTTCTTGATCTTCTCAATCAATATGAGTTCTCCAAAATCCAGGTTGCAAAACTTGTGAAGAAATGTCCTTTGGTGCTTCTTGCAGATGCAAAGAGTACCCTTTTGCCTAAACTTAAGTTTTTCTTATCTATTGGGGTTTCCAACACCGACATACCTAAAATTCTAATTGCTAACAACAATATCTTGTTTGCAAGCTTGGAGAAATGTCTTATCCCATGTTATGATATCCTAAGGAGTGTAGTTTGTGATAATGAGGAGACTGTTAGAGCTTTGAAAAATGCCCCACTTTGTTTTACATATGGTAACATGATGAATCACTTGGTTCCAAACATTAAGTTTTTTAGGCAATCTAGTGTACCTCAAGCTTCCATATCTCTCTTGGTGGTCCATTTTCCAATTGCCAACAATGCTAAGGAAATTGGGTGTGATCCTTCCAAGATGACTTTTATACAGTCTCTTAATGTACTTTTGACCATTAAGAAAACAATTTGGGATTCAAAATTTGATCTTATGAGAGGTGGGGCTGGGGCCACTAAATGTCTCTTCAAGCATTTGCCAAATATAGCTAATTATCCCCCAATTCTAGCCTACAGCTTGGAGGAGAGGATTATCCCTAGATTCTCATTAATTAAAATCTTGCGTTCAAAATGTTTGCTTAAGAAAGATTTGCACTTCAGCTCCTTTATGTGCTTAACCGAGGGAAACTTTTTGAAGAAATTTGTCATCAAATATAAAGATGATTTGCCTCTATCAGATGTCTACAAAGGTTTGTTCAATCATCAGAATGTAATG 2217 0.3978 ALCPQQLLCKEKKVDAAFKRKPLDLLTCYAYGMNILTETVEWSIEICKFTSSASSFARYNTTHFQLGSHSLNALLFSRKFFTSDRNHHKGDTFTVSYLIDSCGLSPTLARELSNRVKLKTPDGPNAVLDLLHNYGFSETQVARLVEKRPVVLVTKAQRTLLPKLKFLRSIGFSNIDIPKILLRNHVILGSSLENRLIPHYEILRGIVQDDHNVVRALRNAPANFSSSYLKLKMDLTLNIEVLRQSGVPQSSITFLMIHYPTAAYAKHFKFLEAVETIKEIGIDPLKTNFVVGVQVLSTMRKIVWKSRLELYERWGWNREMFLKAFRMYSNFVKLSDKLFTKKMSFLVKDMGLSPENIADFPVVLTYSLEKRMIPRFSVIKILKSKGLLRNSAHFTFMTQDEETFLEKYVVNFKKHLPLLADVYKGTSSDSDSDANHHKGDNFTVSYLINPCGVSPKKARELSKRLNLQNPDGPNAVLDLLNQYEFSKIQVAKLVKKCPLVLLADAKSTLLPKLKFFLSIGVSNTDIPKILIANNNILFASLEKCLIPCYDILRSVVCDNEETVRALKNAPLCFTYGNMMNHLVPNIKFFRQSSVPQASISLLVVHFPIANNAKEIGCDPSKMTFIQSLNVLLTIKKTIWDSKFDLMRGGAGATKCLFKHLPNIANYPPILAYSLEERIIPRFSLIKILRSKCLLKKDLHFSSFMCLTEGNFLKKFVIKYKDDLPLSDVYKGLFNHQNVM 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01046 739 Pfam mTERF 128 283 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 Pfam mTERF 236 404 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 Pfam mTERF 477 625 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 322 353 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 527 558 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 660 691 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 354 388 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 563 595 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 SMART mt_12 491 522 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 Gene3D Transcription termination factor 3, mitochondrial 447 723 IPR038538 -
Pste7g01046 739 Gene3D Transcription termination factor 3, mitochondrial 105 232 IPR038538 -
Pste7g01046 739 Gene3D Transcription termination factor 3, mitochondrial 233 416 IPR038538 -
Pste7g01046 739 PANTHER CGI-12 PROTEIN-RELATED 663 720 IPR003690 GO:0003690|GO:0006355
Pste7g01046 739 FunFam Mitochondrial transcription termination factor-like 192 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01046 Pste-Chr7 9588075 9595912 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pste7g01046 mTERF 9.3e-19 No_clan