Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01044 CAACCATCTGTTGTAGCTAGCAACTGTCCGCTGCCTCTGACCACATTCACCTCTGCAAGTCGCCGCCGGCCACCGTTTGTTATGGCCAACCACCTTGTTTTGTTCCCGCAAGAACCCATCAGAAGCGCCTCTTTGTCTGCAACAAAACCCACAAGTTGCATAGATGAGAAACCTCTTCGCACGCTCACATGCGCCTCATCTTCTCTGATGATCTCCTATTTTCTATGTCAGATCTACTCCTCAATGTCACCAGAGCCGCCGCGTCGATCATTGGAGAAGTCGCCTGAGTTGTTGTTGTTTGGCTACTTTTTAACGGCTGTGGTTGACCACAGTGAGGGCAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTCGAATACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACAGCATTGAGTCAGGAACTGGAGGTGCTAAACTATTGAAAGCATCACTTGGGTCTATAGATTTTATCACTTCCTTTTGTCAATCTGAAGATGAGTCAGAAAAGATCAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGAATATGTTCATGCTGCTCTTTCAGTTAATCAGAAGGTAACATTGATTCATCTAGAGGATAGGCCTCGTCCTGGGGTTTCTAATGTTATTCAAGAATTGCAAGATGAAGCCAAGTTACGTGTGATGATGTTAACTGGTGATCATGAGTCTAGTGCTAGGAGAGTTGCAAGTGCTGTGGGCATCAATGAGTTTCATTGCAACCTGAAGCCTGAAGATAAGCTAAGTCATGTAAAGGATATTTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGCATCAATGATGCCCCGGCACTAGCTGCTGCAACTGTTGGGATAGTTCTTGCTCATCGGGCTAGTGCAACTGCTATTGCTGTCGCAGATGTATTGTTGCTCAGAGAAAACATTTCTGCAGTGCCATTTTCTATTGCTAAGTCTCGCCAAACTACTTCACTGATTAAACAAAATGTGGCTTTAGCATTGACATCCATTGTCCTGGCTTCCCTTCCATCAGTTTTGGGATTTCTACCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTCTGTCTCAATTCCGTACGTGCTCTGAATGAACCATCTTGGTCCTGGAAACAGGATATATCACATTTGATTAGAGAGATTAAATCTAGATTCCTGTCTCAAGACAAACATCACATGCTCAAGCAGGACCTTAACGGCCACTTGGTAACGTAG 1260 0.4429 QPSVVASNCPLPLTTFTSASRRRPPFVMANHLVLFPQEPIRSASLSATKPTSCIDEKPLRTLTCASSSLMISYFLCQIYSSMSPEPPRRSLEKSPELLLFGYFLTAVVDHSEGKDLPSVSVESFEYFPGRGLTATVNSIESGTGGAKLLKASLGSIDFITSFCQSEDESEKIKEAVNTSSYGSEYVHAALSVNQKVTLIHLEDRPRPGVSNVIQELQDEAKLRVMMLTGDHESSARRVASAVGINEFHCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFSIAKSRQTTSLIKQNVALALTSIVLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNEPSWSWKQDISHLIREIKSRFLSQDKHHMLKQDLNGHLVT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01044 419 PRINTS P-type cation-transporting ATPase superfamily signature 197 208 - -
Pste7g01044 419 PRINTS P-type cation-transporting ATPase superfamily signature 274 293 - -
Pste7g01044 419 PRINTS P-type cation-transporting ATPase superfamily signature 298 310 - -
Pste7g01044 419 PRINTS P-type cation-transporting ATPase superfamily signature 220 230 - -
Pste7g01044 419 PRINTS H+-transporting ATPase (proton pump) signature 274 290 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste7g01044 419 PRINTS H+-transporting ATPase (proton pump) signature 306 331 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste7g01044 419 NCBIfam HAD-IC family P-type ATPase 173 354 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste7g01044 419 Pfam haloacid dehalogenase-like hydrolase 112 287 - -
Pste7g01044 419 SUPERFAMILY HAD-like 194 374 IPR036412 -
Pste7g01044 419 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 106 408 - -
Pste7g01044 419 Gene3D - 206 325 IPR023214 -
Pste7g01044 419 Gene3D - 105 205 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01044 Pste-Chr7 9557896 9564795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01044 106 399 Primary Pumps ATPases AT4G37270 78.571 6.63e-163 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01044 7 9557896 9564795 Pste7g01044 7 9557896 9564795 ECH