Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01042 ATGGAAACTCTTCTTTATTCTATCCCTTCCTCCAAATTCCACTATCTTCATCCTTACTCTCACACTCGCTTTCGATCCCCCAATTTTCCTCTTCGCCTGCCCCCAATTTCAATCAAACCTTTATATTCCCCCAAATTTCTCATTCTCCATCACCACCCGCTTCGTTGCGTCGCTCAATCCTCCGATAATCACCATCACCATCATCATAACCATAACCATAACCATCTTCATCACCATCAGCATCAGCATCAGCATCACCATCACCATCATCACTCGCACGGCATCCATGGTGCTGTTCTCACCGGTCCTCAAAAGGCGCTCATCGCGTTCGCCAAAGCCACAAGATGGATGGACCTGGCAGATATCCTGAGGGAGCACTTGCACCTTTGCTGCTTCTCCGCCGCCTTATTTGTCGCCGCCGCCATTTGCCCTCACACCTTGCCCAAGCCAATCGTCAAGCCCTTTCAAAACTCTCTCATTTTCGTCGCCTTTCCTTTGGTTGGGGTTTCGGCTTCACTTGATGCTCTTATTGAGATCTGTAGTGGAAAGGTTAACATCCATGTTTTAATGGCAATGGCAGCCTTTGCATCCATATTTATGGGAAACTCTTTGGAAGGAGGCTTGCTTCTTGCCATGTTTAATCTTGCGCATATAGCCGAAGAGTATTTCACCTGCCGTTCCGTGGTTGATGTTAGAGAGTTGAAAGAAAATAATCCAGATTTTGCTCTTGTTCTGGATACCAATGATGATAAACTTCCCAATACATTTGACTTGGCATACAAGAGGGTTCCCGTGCACGATGTAACCGTAGGATCATATGTTTTGGTTGGCGCTGGGGAGTCTGTTCCAGTAGATTGTGAAGTATTCCAAGGCAGTGCCACAATTACCATCGAGCACTTGACAGGGGAAGTCAAACCTTTGGAATCCAAAATTGGAGATAGAATTCCTGGTGGTGCAAGGAACATAGATGGGAGGATAATTGTGAAGGTAACAAAAACTTGGGAGGAATCAACTCTAAGCAGAATTGTTCAGTTGACTGAAGAAGCACAGTCAAATAAACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAACGCTATAGCAAAGTTGTTGTGGTTCTATCAATTGCTATTGCTGTTATTGGGCCACTTTTATTCAAGTGGCCATTCTTTAGTACATCTGCTTGCAGAGGTTCAATTTACAGAGCCTTAGGGCTTATGGTAGCAGCATCACCTTGTGCCTTGGCTGTGGCCCCATTGGCATATGCTATAGCAATCAGTTCCTGTGCCAAAAAGGGGATATTACTCAAAGGTGGGCATGTTCTAGATTCTCTAGCTTCATGTCATACTATTGCATTTGACAAAACAGGGACATTGACAACTGGTGGACTTGTATTCAAGGCAATTGAGCCCATTTATGGTCATATAGTTAGAAACAATGAATCAAATGTTTCTTCCTGTTGCATTCCCACCTGTGAAAAGGAAGCTCTTGCTGTTGCTGCGGCTATGGAAAAGGGTACTACTCACCCTATCGGAAGGTATTGTTTTGAATAG 1554 0.4453 METLLYSIPSSKFHYLHPYSHTRFRSPNFPLRLPPISIKPLYSPKFLILHHHPLRCVAQSSDNHHHHHHNHNHNHLHHHQHQHQHHHHHHHSHGIHGAVLTGPQKALIAFAKATRWMDLADILREHLHLCCFSAALFVAAAICPHTLPKPIVKPFQNSLIFVAFPLVGVSASLDALIEICSGKVNIHVLMAMAAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTCRSVVDVRELKENNPDFALVLDTNDDKLPNTFDLAYKRVPVHDVTVGSYVLVGAGESVPVDCEVFQGSATITIEHLTGEVKPLESKIGDRIPGGARNIDGRIIVKVTKTWEESTLSRIVQLTEEAQSNKPKLQRWLDEFGERYSKVVVVLSIAIAVIGPLLFKWPFFSTSACRGSIYRALGLMVAASPCALAVAPLAYAIAISSCAKKGILLKGGHVLDSLASCHTIAFDKTGTLTTGGLVFKAIEPIYGHIVRNNESNVSSCCIPTCEKEALAVAAAMEKGTTHPIGRYCFE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01042 517 Gene3D - 445 462 IPR023214 -
Pste7g01042 517 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 454 513 IPR023299 GO:0000166
Pste7g01042 517 SUPERFAMILY Calcium ATPase, transmembrane domain M 188 446 IPR023298 -
Pste7g01042 517 NCBIfam HAD-IC family P-type ATPase 260 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste7g01042 517 SUPERFAMILY Calcium ATPase, transduction domain A 260 345 IPR008250 -
Pste7g01042 517 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Pste7g01042 517 Gene3D - 463 514 IPR023299 GO:0000166
Pste7g01042 517 MobiDBLite consensus disorder prediction 64 95 - -
Pste7g01042 517 Gene3D - 226 350 - -
Pste7g01042 517 MobiDBLite consensus disorder prediction 60 97 - -
Pste7g01042 517 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 50 513 - -
Pste7g01042 517 Pfam E1-E2 ATPase 260 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01042 Pste-Chr7 9542972 9547977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01042 103 513 Primary Pumps ATPases AT4G37270 77.129 0.0 627