Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01035 CTTGGACACATTGAAAACATTCTATGGTTGATGCTGCTTTCACATTAGATGCAAAACAAGACTTACATATATTCTTCCATATAATTAAGGTTCTCTTGCTATTTCTTCACGACGTGAAAGTGAAGAAAAATGAAGAATTCTAAGAAAACAGGTGTACGAAAATACCACAAATCTGAAAATCCACGTTTGCGTTGGACACCTGAACTCCATGAATACTTTGTTGAAGTTGTGGAAGGTCTTGGTGGAAAAGCCAGGGCAACCCCAAAGAACATTCTGCAGATGATGCATGTCAAAGGACTAAGGATCTCTCATATTAAAAGCCATCTTCAGATGTACAGGAACATTAAGGGACATACCATTCTTTCATCAATGCATCAGGAGATGGAAGGAAATGAACATGTTAATGATCTTCCAATCTGCTCCAATTCTTCATCCCAAAGATCACAAAGAGCTAAATCAAGAGAATCAAAATATGATACGGATATTGTCAATCAAGAATTTCACCACTTAGAAAACAAAGGACTTTCACAGACCAGTGAAACTGATTACGATCTAAATCAGGAACCTGCTGAATGGAGTGCATGTGTACTAAGTGATACATCAAATGAAGAAAATAGTGGGACAATGAAATTTCTTAATCTCTCATTTTCTTTAAGCTCTTCACTAATTCCAACGATGCACGGTGATCAAGAGAGAATGCGTTTTTCTTCACCAAATACAGCAGATAATCACGTTGCTGATTCTAATTCTGTTCAATATCATGTTGGGAGCAATTATATAAACTTAGACCTAACAATATGAATATGTATCATTTTTGTAAACTTAATTAATTACACGTATTACTTATCGTAGCTAAGTTTAGGTTTTATTTGGCGAAGATCTACAGAAGTTAACGAATATTATGGTATTATCTCTCAAATAATTAAAAGGTTTAAGCAGACTTCTATTTAAGTTTATTAATTTTTTCTGTACGGAGTTACGTTTTGTGACCATTTAATGACTTTTGTTTCTCTGCCAACAAAT 1023 0.3431 MKNSKKTGVRKYHKSENPRLRWTPELHEYFVEVVEGLGGKARATPKNILQMMHVKGLRISHIKSHLQMYRNIKGHTILSSMHQEMEGNEHVNDLPICSNSSSQRSQRAKSRESKYDTDIVNQEFHHLENKGLSQTSETDYDLNQEPAEWSACVLSDTSNEENSGTMKFLNLSFSLSSSLIPTMHGDQERMRFSSPNTADNHVADSNSVQYHVGSNYINLDLTI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01035 223 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Pste7g01035 223 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Pste7g01035 223 MobiDBLite consensus disorder prediction 91 115 - -
Pste7g01035 223 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Pste7g01035 223 Gene3D - 17 73 - -
Pste7g01035 223 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 129 IPR046955 GO:0003700
Pste7g01035 223 FunFam Two-component response regulator 13 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01035 Pste-Chr7 9489540 9494502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01035 8 70 G2-like Transcription Factor Family AT1G14600 66.667 9.51e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste7g01035 Myb_DNA-binding 1.3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01035 7 9489540 9494502 Pste7g01035 7 9489540 9494502 ECH
Pste7g01035 7 9489540 9494502 Pste8g00617 8 3194392 3197042 PCT