LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g01023	ATGGCCATCCTTCAGCTCCACAGAATTCAACACTATCTCTGTGCAGTAGTACTTGTTTTTCATCTTCAGTTCTCGTCCCACATGTTCCCCTCACTTGGGTACAACGTCCCAGATAAGTACTTTATCAATTGTGGCTCTGATAGCAGTGTTACAGTTAGTGACAAGGTTTACGTTGGTGAATCGAACCCTGTTGCCCGTTTTAGCAGAAGCGAGACAGAAAGCAACGAGTCACATGTGCCTTCTCCCCTATACCAAACAGCAAGGATTTTTCGACGTGAGTCTTCGTATCAGTTCCGTATCGACAGAAATGGCACCTACCTCGTACGCCTCCATTTCTTCTCTTTCTCATCCCCTAGCAATCTTTACTCCGCCAGGTTCAACGTTTCAGTTCCTGGCTTCTGGCTGGTTCAAAATTTCGATGCCAGAAATGATACCGATAATAACTTTGCTCCTGTAAAAGAGTTTTTCATGCAAATCAGTACCCCCATCTTCAGAATCACTTTTAGACCTCTGCCATCATCATTTGCGTTTGTGAATGCTATAGAACTCTTCCTACTCCCCCTCTACTTGATCGCCGATGAAGTGGGGCTTTTCACTCATGGCAATAGTGCACACTTATCTTCTTATAATGGTTTGCATGCTCGGGTGTTGGAGACCAAACACAGGCTTAATGTTGGAGGCCTAATGGCCAACGATAACTTATTCAGAAAATGGTTTCCAGACGACAGTTATCTCACTTATCCAGAAACAGCCAACACTAGTTACCCTTTCTCGGGTCAAATTGAGTACCGTGTAGCTGATGACTCCGATGGTCCAAATGCAACAAAATTTACTGCTCCAAGTGCTGTTTACGGAACTGCTAAAAAGATCAATAACATCTCTGCCAACACCAGCACCAATACAATAGACTGGAACCTTTTAAACATAACATGGGGTCTTCCTGCCGAGAGGAACACAGTTCATCTCCTTCGATTTCACTTCTGTGACTATTGGAGTCGGCACAGTGGTCTTACATTCTTCAATCTGGCCATTTACGACAACCATGTTATAGAAATAAATAATGACCCCAACGTGTCTCGGCAATTTGCAGCCCCTTATTATTATGACCTTCTGGTGCACTCTGATGACTCTGGGCAAATCATGGTCAGCGTAGTACCGGATGCATACGGCCCCAAACCTGATGCGTTTTTAAACGGGCTAGAAATAATGAAAGTGATTGAGTCTTCAAATTCTGTCCCCCCTATGATCGAACTCGATTCCGGGCACAATCTTCTTCGTGTAATGCTAGGTTCAGTTTTTGGAGTTTTAGTCCTGATTTTTGTAGTGGTGCTACTTGGCCTTCTTTGGTGTCTTAAACTGAGGAAGGAAAAGAAGCTTGAGAATTCGGTCTGGTTGCCCATGCTCGTTCCTGCTGGAGAGACTTCTCACAATAGATTGACGGAGGGAACCAGTCAAGGCTCTACTCTTCCTTACATAAACCTTGGACTGAAAATTCCATTGCTCGATCTTCAATTGGCAACCAATAACTTCCATGAAAGCCAGATAATTGGAAAAGGCAGTTTTGGCAACGTCTATAAGGGGGTTCTCCAGAATGGCATGATTGTGGCTGTGAAAAGAGGTGAGCCTGGGTCGGGTGAAGGCCTCCCAGAATTTCATACCGAGATCATGGTCTTGTCCCAGATTCGTCACAAGCAACTTGTTTCCTTAATTGGGTATTGTGATGAAAGCTTTGAGATGATACTGGTTTATGAGTACATGGAAAAAGGGACACTCAGAGACCATTTGTACGATACAAACTTGCCAAAATTGTCTTGGAAGCAGAGGCTTGAAATTTGCATTGGAGCGGCCAATGGTCTTCATTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGACATAAAGTCCACCAACATATTGCTTGATGAGAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCAAGGACAGGTCCTCTTGATCATCAATCATATGTCACCACCGTCGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTTAGATCGCAACAGCTGACAGAAAAATCAGATGTCTATTCATTTGGAGTAGTCCTTTTGGAAGTATTGTGTGCAAGAGCTGTGATTGACCCATCGCTTCCAAGAGAGCAGATAAACTTGGCTGAATGGGGAATGCTTTGCAAAAATAAGGGGATACTTCAAGATATTGTTGATCCTTCCATCAAGGGCCAAATAAATCAAAACTCACTTAGAAAATTTGTTGAAACGGTAGAAAAGTGCTTGCAAGATGATGTTTGTGATAGGCCGACCATGGGTGGTGTGTTGTGGGACTTGGAGTATGCGTTGCAGCTTCAGAAAGGAGCAAATGCAATACATAAGGTGCAGCCTGAGGATAGTTCTACTAGTGCTTCTGCTTCACTTCAATTATCCAATGTTCGGCATTTTCCATCAATCTCAACACTAGCTGAAAGGGATAACATGTCCATTGTGAAGAGTGATGAGCTCGATGGTGCTTCGGATTCCGTTTTCTCTCTGTTGAAAATTGATGACACGAGATAG	2565	0.4366	MAILQLHRIQHYLCAVVLVFHLQFSSHMFPSLGYNVPDKYFINCGSDSSVTVSDKVYVGESNPVARFSRSETESNESHVPSPLYQTARIFRRESSYQFRIDRNGTYLVRLHFFSFSSPSNLYSARFNVSVPGFWLVQNFDARNDTDNNFAPVKEFFMQISTPIFRITFRPLPSSFAFVNAIELFLLPLYLIADEVGLFTHGNSAHLSSYNGLHARVLETKHRLNVGGLMANDNLFRKWFPDDSYLTYPETANTSYPFSGQIEYRVADDSDGPNATKFTAPSAVYGTAKKINNISANTSTNTIDWNLLNITWGLPAERNTVHLLRFHFCDYWSRHSGLTFFNLAIYDNHVIEINNDPNVSRQFAAPYYYDLLVHSDDSGQIMVSVVPDAYGPKPDAFLNGLEIMKVIESSNSVPPMIELDSGHNLLRVMLGSVFGVLVLIFVVVLLGLLWCLKLRKEKKLENSVWLPMLVPAGETSHNRLTEGTSQGSTLPYINLGLKIPLLDLQLATNNFHESQIIGKGSFGNVYKGVLQNGMIVAVKRGEPGSGEGLPEFHTEIMVLSQIRHKQLVSLIGYCDESFEMILVYEYMEKGTLRDHLYDTNLPKLSWKQRLEICIGAANGLHYLHKGAAGGIIHRDIKSTNILLDENHVAKVADFGLSRTGPLDHQSYVTTVVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPREQINLAEWGMLCKNKGILQDIVDPSIKGQINQNSLRKFVETVEKCLQDDVCDRPTMGGVLWDLEYALQLQKGANAIHKVQPEDSSTSASASLQLSNVRHFPSISTLAERDNMSIVKSDELDGASDSVFSLLKIDDTR	854

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g01023	854	ProSiteProfiles	Protein kinase domain profile.	510	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste7g01023	854	Gene3D	-	39	185	-	-
	Pste7g01023	854	Gene3D	-	217	406	-	-
	Pste7g01023	854	SUPERFAMILY	Protein kinase-like (PK-like)	488	781	IPR011009	-
	Pste7g01023	854	ProSitePatterns	Protein kinases ATP-binding region signature.	516	538	IPR017441	GO:0005524
	Pste7g01023	854	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	630	642	IPR008271	GO:0004672\|GO:0006468
	Pste7g01023	854	PANTHER	OS07G0166700 PROTEIN	497	787	IPR045272	GO:0004714\|GO:0006468
	Pste7g01023	854	Pfam	Malectin-like domain	42	405	IPR024788	-
	Pste7g01023	854	Gene3D	Phosphorylase Kinase; domain 1	474	585	-	-
	Pste7g01023	854	FunFam	receptor-like protein kinase FERONIA	474	585	-	-
	Pste7g01023	854	Gene3D	Transferase(Phosphotransferase) domain 1	586	804	-	-
	Pste7g01023	854	Pfam	Protein tyrosine and serine/threonine kinase	513	775	IPR001245	GO:0004672\|GO:0006468
	Pste7g01023	854	SMART	serkin_6	510	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste7g01023	854	FunFam	Receptor-like protein kinase FERONIA	586	802	-	-
	Pste7g01023	854	CDD	STKc_IRAK	516	781	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g01023	Pste-Chr7	9393083	9395647	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g01023	33	789	Receptor kinase-like Gene Family	AT4G39110	43.959	0.0	583

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pste7g01023		Malectin_like	2.8e-20	CL0202