Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01014 GCAGCACCATTTACCTTAGGAATTTTGCTCTCTCTTTCTCTCTCTGCTGATGTCACTGTCTTTATTGCTGTTAAAAACTCTTCTATATACTTTGTTTGGTTAGCCATGAACAACAGTATTCCTGATTGGAATTTTGGGAGTGATTCATGTGTCACCACCTCCAATCAAAAGAAACCTATGGGGGTGGACCAAGAGCTTGTAGAGCTCCTGTGGCAAAATGGCCAGGTAGTTTTGCACAACCAAACACATAGAAAACCAGTTGCGAATTCGATTGCGCCGAGACCGTTTCAAAGAAATTTTCAACCAACATTAAGGACTAGTGAGCCATTTGGGAACTCAAGTAATTTGATTCAGGATGATGAGACAGTGTCATGGATCCATTACCCTCTTGAGGATCCATTGGAACAAGAATTCTGTTCAAACCTTCTATCTGAACTGCCACCATGTGAAGTTGAGTCCTATAAGCAAATCAAGCCTTTTGAAGAGGGAAAGTTTACCAAATTGGATGCCTGTAGAGCCCCCCATGTGACTGTAAGTTCGCAATCACCTACTATGAAACCCTCCTCTTTTCAGGAATTCCCAGGAATTCCTATACCTGCTCCAAGATTCCATGTTGATTCACCTCAGAAAAGCAATAATGTCTTGGGTGGATCATTTAAGGTCCAAAACTTCTCTCACTTTGCAGCACCCCTTAATGTTTCTTCAGCATCGGCTAATGCGCATTTTAGAGACGAAATTACTAGTAACATGTCAAAAAATGAGATTAGAGAATGCTCAATGATGACAGTTGGGTCAAGTTATTGTGGTAGCAATCACATCCCCCAAGATCCTGATGCAAGCAGGGCATCAAGCAATGGTGTTTGGACTACTACTTTATCCGCTGAGCCTGAAGCTGTCAGAGATGATTTGCCTAGAACAATTCCTCATAATGAGAAAGGGAAATCAGAGATGCTAGAACCAACTGCAACTTCATCTTCTGGTGGTTCAGGTAGTAGTCTTGGAAAAACTTGTTCCTTATCTACCAGAAACCAGGGCCAAAAAAGAAAAGGAATAGATGTGGAAGAATCTGAGGAGCAAAGTGAGGACACAGAACTTAAATCAGGAGTTGGAAACAAATCATCTCAACGAGCAGGGTCAGCTCGAAGGAACCGCGCTGCTGAAGTGCATAATCTATCAGAGAGGAGAAGGAGAGATAGGATCAACGAGAAGATGAAGGCATTGCAGCAACTCATACCTCACAGTAGCAAGACAGACAAAGCATCAATGTTGGAAGAGGCAATTGAATACTTGAAATCACTTCAGTTACAACTTCAGCTGATGTGGATGGGATCTGGCATGGCACCAATGATGTTTCCAGGAATGCAGCACTATATGTCACAAATGGGTATGGCAATGGCTACGCCACCTTTCCCTCCTATTCAAAATCCAATGCAATTACCAAGAGTGCCGCTTGATCAGTCTGTATCTGCATCTCAGACATCAAACCAGACATTTATGTGCCAAAATCCTATTTTGGGTGCCTTTAATTACCAAAATCAGATACAAAATCCAGCTCTTTCAGAGCAATATGCGCGTTACATGGGCTATCATCTCATGCAAAATGCCTCTCAGCCAATGAATGTATTCAGATATGGTCCCCAGGCAGTACAGCATAGTCAAACAATGATTACACCAAGCAACAGCAGTGGAAACATTAGTGGAGCAGCTAATATTGAGGAGGCTGTGAGTGGCAAAATGGGTTAATTAGTTTAGAAGAACACCTATGGGAACCTATGGCGTAACTGACAAGATAATTGCAAGCTGATACAAGCCCTTGTATGCTTTCACAGTATGTCTGCCTGCTCATATATATACGAATCTTTTGTACATATTGTCCAAACCAAAAGCAACAAGAATGGAGTAAAATAAAAATAAAATAAAATTATGAGATATAGAAGTGAATATTTTGAATAAAAACGGGCACCTCCCATGCAGTGATATAATAGAGTAAAATAAAATAAAATAAAATTATGAGATATAAAAGTGAATGGCTACCTTAAAAGTAATAGAGTTTTTCTTTTTTTATCATACATAATTACTTTATTAATTGCTTGGACACTGATATATGAAAGGGTCCTCATTATTTGATGTTAGATGGAGCATAATATACTTTTGTGGATTTTGCTTATGCTGATATGCATAAGCACAGTAAAGGCAGGGCTATAATTTGGTAGTATGTGAGCCATCATTGTTTTTAAATGCAATAATTAGTTACTATGAAGGGACTTAAATTAAGATGCATTCCTAGCCTATAACATGCTACCTTTTGATTGAGAAGATTTATTCAACTAGATTAGGTCATCATTTTTCCTTGTTTTTCTATAGCTTACATGATGTCCTAGCCTCCTAGGGTGCTTGCATGACCAAAGCACAAGATTTTACCAAAATCAACATGTTGGGTGAGCATGCATAAGCTTGAAAAGGTTAGGTGATGCATGATTAATTGCTCCTTTAGGCTTTTCTTTCTCTCAACTACAAATCACTTCCTCATAGTTTTTCTGCTGTCGTCAGATAGTAATTATTCACAGGTTGAATGCTGAACTCTACAATTTTTACCTTAACCTGAAAAAAAATGTCTTGAGAAATGAATATGTACCCTCCACTTTGTGTGTGATGCTTTCTTTATCTTTAGTCAAGCTACAAATAAATGTGGTTGGGGTGGTCCCCTTCATCAAAATTAAAGTAGTCAACTAACTGCTAAAATTTGGATACCACAAAGTATTTGTACCAAGTTGATATCTTGCCATGGGACCTAAAAATAGACACTTGCTCAATCCATGAGTTATTGCCGCTCAACTGCGGTCCCCACCATCGGAATAGCCATCAAAACTAAGCACAACTCACTTTGCAACCCTTGGTCATGGTTTTGTTACATATCATAATCCATACTTTATAACACTCCATTTACACAGGTCTCCTCCAATTTGCTATGTTCCTTCTTCATTTTCTTCCCTTTTCTACTTTCCAGGTTCCTCCACTTTTAACTAAATAGCAGTACTTCATCAAACATCCTTAATTGGAGGGTTTGGATGGTGGAATTAATCAACCCTGAAAGCGCCAAGATATTGATATATATACTCAAAAATTTGTGTAGTGTGGTAACCATGCAATTTATGTCAAATGAAGAGTTTTGTTGTCTAACTTTGAGAAAAATTGTATTAGACAGGTCCTTCATTATGGGCCAGTTTTGTTCTCAGCTCCCATGTCCCATCAGGTAGAGCATTTTCAACTGTTTGTAGATCTGGGATAGTAACATGATGTGCTAATATTTTTGGCTGAAATATGCAATCATTGTGTCTCAAATTCTCAC 3349 0.3876 AAPFTLGILLSLSLSADVTVFIAVKNSSIYFVWLAMNNSIPDWNFGSDSCVTTSNQKKPMGVDQELVELLWQNGQVVLHNQTHRKPVANSIAPRPFQRNFQPTLRTSEPFGNSSNLIQDDETVSWIHYPLEDPLEQEFCSNLLSELPPCEVESYKQIKPFEEGKFTKLDACRAPHVTVSSQSPTMKPSSFQEFPGIPIPAPRFHVDSPQKSNNVLGGSFKVQNFSHFAAPLNVSSASANAHFRDEITSNMSKNEIRECSMMTVGSSYCGSNHIPQDPDASRASSNGVWTTTLSAEPEAVRDDLPRTIPHNEKGKSEMLEPTATSSSGGSGSSLGKTCSLSTRNQGQKRKGIDVEESEEQSEDTELKSGVGNKSSQRAGSARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQLMWMGSGMAPMMFPGMQHYMSQMGMAMATPPFPPIQNPMQLPRVPLDQSVSASQTSNQTFMCQNPILGAFNYQNQIQNPALSEQYARYMGYHLMQNASQPMNVFRYGPQAVQHSQTMITPSNSSGNISGAANIEEAVSGKMG 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01014 580 Gene3D - 379 440 IPR036638 GO:0046983
Pste7g01014 580 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 382 448 IPR036638 GO:0046983
Pste7g01014 580 FunFam Basic helix-loop-helix transcription factor 379 442 - -
Pste7g01014 580 MobiDBLite consensus disorder prediction 298 316 - -
Pste7g01014 580 SMART finulus 390 439 IPR011598 GO:0046983
Pste7g01014 580 CDD bHLH_AtPIF_like 384 447 IPR047265 -
Pste7g01014 580 Coils Coil 390 410 - -
Pste7g01014 580 MobiDBLite consensus disorder prediction 317 346 - -
Pste7g01014 580 Pfam Helix-loop-helix DNA-binding domain 388 434 IPR011598 GO:0046983
Pste7g01014 580 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 384 433 IPR011598 GO:0046983
Pste7g01014 580 PANTHER TRANSCRIPTION FACTOR PIF3 52 543 IPR044273 GO:0003700|GO:0006355
Pste7g01014 580 MobiDBLite consensus disorder prediction 291 398 - -
Pste7g01014 580 MobiDBLite consensus disorder prediction 366 380 - -
Pste7g01014 580 MobiDBLite consensus disorder prediction 382 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01014 Pste-Chr7 9304884 9310611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01014 10 553 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 34.929 1.74e-60 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g01014 HLH 1.8e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01014 7 9304884 9310611 Pste7g01014 7 9304884 9310611 ECH
Pste7g01014 7 9304884 9310611 Pste8g00632 8 3262908 3267836 PCT