Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01002 ATGTCTGGGAATCCCCAAGAGCAGCCACTGCTAGCGGACTCGTTCCAGGAAGAAGACGAGCTGCAAGAGACAGCATACGATTCCTCGGAGAAGATTGTGGTGGTTGGAATCGACGAATCAGACAACGAGGAAAACTGGGGGAGAGTGCCCCCGTTCTCCTGGAAAAAGCTATGGCTGTTTACCGGGCCGGGCTTTCTCATGAGCATAGCGTTCTTGGACCCGGGGAACCTCGAGGGGGACCTTCAGGCTGGTGCCACTGCGGGCTACTCCCTCCTGTGGCTTCTTATGTGGGCCACGGCTATGGGCCTCCTCATCCAGCTCCTCTCTGCGCGGCTCGGCGTGGCCACCGGGAAGCACCTCGCCGAGCTCTGCAGGGAGGAGTACCCTTCGTGGGCCCGGATAGTGCTTTGGGTAATGGCCGAACTCGCACTCATTGGCTCCGATATTCAGGAGGTCATTGGGAGCGCTATTGCTATCAGGATTCTCAGTGGTGGTGTTGTGCCCCTTTGGGCTGGGGTCGTTATTACTGCTCTTGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGACATTGGAAGCTTTTTTTGCTGTTCTCATTGGTGTGATGGCAATCTCATTTGCATGGATGTTTGGTGAAGCGAAGCCTAGTGGCAAGGAACTTCTTCTAGGTGTTTTGATTCCAAAGCTCAGTTCCAAGACTATACAAAAGGCCGTGGGAGTTGTTGGGTGCCTTATTATGCCTCACAATGTGTTCTTGCACTCTGCCCTTGTTCAATCAAGGCAGGTTGACCGTAGCAAGAAAGGCCGGGTTCAAGAAGCTCTTAATTATTACTCTATAGAGTCCACCCTTGCTCTTGTAGTCTCCTTTATCATAAATATATTTGTCACAACTGTGTTTGCTAAGGGGTTTTATGGTTCTGAACTTGCAAAGAGCATTGGCCTTGCAAATGCAGGACAGTATCTTGAGGAGACGTATGGGGGTGGACTATTTCCAATTTTATATATATGGGGTATTGGGTTATTAGCAGCAGGACAGAGTAGCACTATTACCGGCACTTATGCGGGACAATTCATCATGGGAGGGTTTCTAAATTTAAGGTTAAAGAAGTGGATAAGGGCGTTGATTACCCGGAGTTGTGCAATAATTCCAACCATGATGGTTGCTCTTATATTTGATACCTCGGAGGAATCATTAGATGTTCTGAACGAGTGGCTTAATGTTCTTCAGTCAGTGCAAATCCCCTTTGCACTTATTCCCTTGCTATGTCTGGTGTCGAAGGAGCAGATAATGGGCTCTTTCAGAATCGGCACTGTCACCAAGATTACTTCGTGGCTTGTGGCTGCTCTGGTTATAGTGATTAATGGCTATCTTTTGACAGAATTCTTTTCCTCGGAAGTGAAAGGACCAATAATGAGCGGTGTAGTGGGTGCAATAACAACTGCATATCTTGCATTTGTAATATACCTTATCTGGCAGGCCATCACCTTTTTACCTTGGAAAAACGGAACAAAACCACAGACTATTACTCACTCAGAGGGTTGAACGATCAATTTTTAACTGGGATAGAAAGTGCCATCCTTCTCGCTCGTATGTGTGTAATTACGAATTCTGTGACAGTAGATTTTAGCTCTCTATCACTTTCAAATATTGTTGTTGTCTAAAATGCCTTGGAAACACATTGATTAGTTTAGACACCTTCACGCCTGTAGTACTGTGCAAAACAAGCAATGAAGGTCTTCATTTTCCTTCTTCCCTCGATCTTCATATTCTATTGGGCGGGAGCTGCGATCAACAAAATTACACCGAATACTTCAAAGCTAAT 1831 0.4626 MSGNPQEQPLLADSFQEEDELQETAYDSSEKIVVVGIDESDNEENWGRVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGATAGYSLLWLLMWATAMGLLIQLLSARLGVATGKHLAELCREEYPSWARIVLWVMAELALIGSDIQEVIGSAIAIRILSGGVVPLWAGVVITALDCFIFLFLENYGVRTLEAFFAVLIGVMAISFAWMFGEAKPSGKELLLGVLIPKLSSKTIQKAVGVVGCLIMPHNVFLHSALVQSRQVDRSKKGRVQEALNYYSIESTLALVVSFIINIFVTTVFAKGFYGSELAKSIGLANAGQYLEETYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWIRALITRSCAIIPTMMVALIFDTSEESLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGTVTKITSWLVAALVIVINGYLLTEFFSSEVKGPIMSGVVGAITTAYLAFVIYLIWQAITFLPWKNGTKPQTITHSEG 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01002 516 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 498 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 55 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 NCBIfam Nramp family divalent metal transporter 62 431 - -
Pste7g01002 516 Pfam Natural resistance-associated macrophage protein 78 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 Hamap Divalent metal cation transporter MntH [mntH]. 43 465 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 PRINTS Natural resistance-associated macrophage protein signature 191 212 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 PRINTS Natural resistance-associated macrophage protein signature 375 392 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 PRINTS Natural resistance-associated macrophage protein signature 240 263 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 PRINTS Natural resistance-associated macrophage protein signature 136 162 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 PRINTS Natural resistance-associated macrophage protein signature 347 366 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 PRINTS Natural resistance-associated macrophage protein signature 166 185 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste7g01002 516 PRINTS Natural resistance-associated macrophage protein signature 409 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01002 Pste-Chr7 9203875 9207691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01002 31 502 Inorganic Solute Cotransporters AT2G23150 78.947 0.0 776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01002 7 9203875 9207691 Pste7g01002 7 9203875 9207691 ECH
Pste1g02204 1 7304011 7307868 Pste7g01002 7 9203875 9207691 PCT