Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00999 GGTTTTTGGGTTTCAGAACACGAAAACTGAAAACCGCAATTTCTTCCTCCATTAATCTCCACAACATGACGAGTGTGATCCTCCGAAGATCCTCTTCCGTAATCTCGCGCCGCTTCTTCGCCTCTCTCGCCTCCGTCGAACCGCTTCCGCACCACCGCCGCCACGGCGTCTCCGCCGATGGACTCAGATCCTTTCACGCCAACAAAGGACCGTTGGATTTTCGCTCGTCGCCGGTTTCTCGTGCGGGGCAGTTCGCCGTCGCGCGCGATTACTCCAACGAGGAGCAAAGCTTCGGCGCGAACAGCGACGAAGGACTCGAGATCGCGAAACTCGGGATTTCTTCCGAGATCGTTGATGCTCTTGCCAAGAAAGGCATCGCAAAGCTATTTCCCATTCAGAGAGCTGTACTGGAACCTGCAATGCAAGGACGTGATATGATTGGCCGAGCTAGAACAGGAACTGGGAAAACTCTTGCTTTTGGGATACCCATCCTGGACAGGATCATTCAATTTAATGCCAAGAATGGGCGAGGGAGGGATCCTATGGCTTTGGTTTTGGCGCCAACTAGAGAACTTGCGCGGCAGGTTGAGAAAGAATTCAATGAGGCTGCACCTAACTTGGACACGATCTGTCTTTATGGGGGCATGCCCATCCAGCAGCAAATGAGGCAGCTTAATTATGGTGTAGATATAGCAGTAGGCACACCCGGTCGAATTATTGATCTTCTCAACAGGAGGGCACTAAATTTGAAGGATGTTAAGTTTGTTGTTCTCGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCTGTGGAGAAGATCTTGGAGGGGTTGTCTCCAAATCGTCAGACTCTTATGTTCTCAGCAACAATGCCATCTTGGATAAAGGAAATTACCCGCAATTACCTGAACAACCCCCTAATCATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCACTGTACTCTATTGCATCTGATGCGTACACTAAAGCTGGAATTCTTGCACCACTGATAACAGAACATGCGAACGGTGGAAAGTGTATTGTTTTCACTCAAACGAAACGTGATGCTGATCGATTATCATATGTTATGGCAAAAAGCCTTAGATGTGAGGCCTTGCATGGAGATATTTCACAAACTCAGAGGGAAAGAACTCTTGCTGGCTTCAGAAACAATGACTTTAATGTTTTAGTGGCCACTGATGTTGCTTCACGTGGGCTTGATATTCCCAATGTTGATCTTGTAATACATTATGATCTTCCCAATTCATCAGAGATATTTGTTCATCGATCTGGGCGAACTGGCCGAGCTGGGAAGAAAGGAAGTGCCATTCTTGTTTACACAGACGACCAATTCAGAACTGTTAAGAGTATTGAGCGTGATGTGGGATGCAAATTTACGGAGTTACCAAAGATTGATGTTAAAAGTGGATCAGCAGAGATGTTTGGTAGCATGAGTGGTGGTCGATTTGGCCGTCAATCTGGGGGTACAGGTTTTGGTCGCAGTTCTGGATTTGGCCGTTCTGGGAGTTACAGTAACTCTGGATTTGGCCGATCTAGCTATGGAAATTCCAGTGAGATGGGAAGGTTTGGTGGATCAAATTCAAGCCGTTTTGGTGGCTCTGGTTCAGGTCAGTTTGGAGGATCTCCTGGTGAAACGGGTAGATATAGTGACAGAAAGCTTAACCAAAGCAGCACATTTGGCAATTCAAGTGGTAGAGGTTTTGGTGATTCAGGTGGTTTTGGAGGATTTGGTGGTTTTGGGTCAGGTCAATCTCGTGCATTTGGTGACAGAAAGTTTAGCCAAAGCAGCCCATTTGGTGATTCAGGTGGTAGCCATTTTGGTGCTTTTGGGGATAACTCAAATAATGACAGTTACGGTAGAGGAAAGCCATTTTAACTTCAGCAACTTGGTATCCTGATTCCCCATATTTCTTGAGATGGAAAAGGTTATGGCATAATAATACATTCTATTCTTTGGGGCACCACACTTTTTTTGGGACAAATCTTCACCTCAAACTCCACTCTACTGTGATTCACTTCCTCCATGGCATAAGGTATTGGGAAGGCTGTATCATCTGCATGTTCCACTTCTGCCAATCATTAATTTCCTTAGTTTGGTTTGGTAGATTATGACTATGAACGTACATCAGTGTATGTATATGCCTCGAAAATCTTGTAGTAGCAGCTTTATAGATGGGTGATCCAATTTATATAATATTTGTTCCTCTAAACTCATAATGGTCGAATATAGAATTTTGTAGAAACAGGTAGGTGCCCAGTTGTTCTTGTTATTACAATGCTCTAACTGATGTAATATATATTGAACACTTTGCTTTTTGGTTGCGCCGTGGGTTTCTTCCG 2383 0.4473 MTSVILRRSSSVISRRFFASLASVEPLPHHRRHGVSADGLRSFHANKGPLDFRSSPVSRAGQFAVARDYSNEEQSFGANSDEGLEIAKLGISSEIVDALAKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDRIIQFNAKNGRGRDPMALVLAPTRELARQVEKEFNEAAPNLDTICLYGGMPIQQQMRQLNYGVDIAVGTPGRIIDLLNRRALNLKDVKFVVLDEADQMLQVGFQEAVEKILEGLSPNRQTLMFSATMPSWIKEITRNYLNNPLIIDLVGDSDQKLADGISLYSIASDAYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYVMAKSLRCEALHGDISQTQRERTLAGFRNNDFNVLVATDVASRGLDIPNVDLVIHYDLPNSSEIFVHRSGRTGRAGKKGSAILVYTDDQFRTVKSIERDVGCKFTELPKIDVKSGSAEMFGSMSGGRFGRQSGGTGFGRSSGFGRSGSYSNSGFGRSSYGNSSEMGRFGGSNSSRFGGSGSGQFGGSPGETGRYSDRKLNQSSTFGNSSGRGFGDSGGFGGFGGFGSGQSRAFGDRKFSQSSPFGDSGGSHFGAFGDNSNNDSYGRGKPF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00999 617 MobiDBLite consensus disorder prediction 512 558 - -
Pste7g00999 617 FunFam ATP-dependent RNA helicase RhlE 76 292 - -
Pste7g00999 617 SMART helicmild6 343 423 IPR001650 -
Pste7g00999 617 Gene3D - 85 293 IPR027417 -
Pste7g00999 617 MobiDBLite consensus disorder prediction 512 617 - -
Pste7g00999 617 CDD DEADc 95 290 - -
Pste7g00999 617 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 115 289 IPR014001 -
Pste7g00999 617 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 318 462 IPR001650 -
Pste7g00999 617 MobiDBLite consensus disorder prediction 580 617 - -
Pste7g00999 617 Pfam DEAD/DEAH box helicase 108 277 IPR011545 GO:0003676|GO:0005524
Pste7g00999 617 Pfam Helicase conserved C-terminal domain 318 423 IPR001650 -
Pste7g00999 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 444 IPR027417 -
Pste7g00999 617 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 80 455 - -
Pste7g00999 617 SMART ultradead3 103 306 IPR014001 -
Pste7g00999 617 CDD SF2_C_DEAD 315 432 - -
Pste7g00999 617 Gene3D - 308 468 IPR027417 -
Pste7g00999 617 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00999 Pste-Chr7 9196016 9203756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00999 89 455 Eukaryotic Initiation Factors Gene Family AT3G19760 33.423 4.81e-68 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00999 7 9196016 9203756 Pste8g00655 8 3420109 3425043 PCT