Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00980 AAAAAATAAAGCACAGTTAAATTCAATTCAACAATTAAAAAAAACAAAGTTTGATTTCCCTGTTCAATCTGAAGGTAAAAAAAAAAAACAAAATGTGAAAGGTGATTGGAGGAAGAAGCAAACGAAATAAACAGAGAGAGAAATTGTTCTTCTGTCTCTATTGGCTTTTAACTTTCCCCATAAGTTACTTTCTCTCTTTCTTCTCTCTAAGATGCATTAAGGGTCAAATTGAATGAATCACACAGGCCCACATGTTAAATTTGCATTTTCGTTTGGTTTGGGTCAAATGGGTCTCGTTTTTCTGAGAACCCAGTGAAAAAGGTCGCCCTTTGACTCAAAAACTTGCAGAGAAGAGGGAGATTTGCCACAATTCCTCACAACCATGGAAGAGGCAACCGAGTTGCAATCTGAAGAAAAAAGATTCTCTAATGAGAAAAATAAGAAAAGAAGGCTCAAAACACCTGCTCAGCTTAAGGCCTTGGAAAATTTTTATAGTGATAACAATTATCCCACGGAGGAAATGAAATCAGAACTTGCTCATGAGTTAGAGTTGACAGAAAAGCAAATATCTGGGTGGTTTTGCCACAGAAGATTGAAAGAAAAAAAAATGTTGGATGATGAAGTATGTACTAATGGACGACAAGATCGTTCAAGTGGTGTCATCCAGGATCGTGGCAGTGGTCTAGTGCAGGATTCATGCGGAAGCACTAAACATGTTGATTATAGGTATCTGGAGCCCAAAGAGGTTGAGAGTCAGGGCCTCTATAACCATGAACTTTCAGCTGCAGATATGACTTACGGACACAAGAACCTTCGATATACAGAAAATGATAGTGCAACAGATAACACATCATCTGAGAGTAGGTCATCTTTGCAAGACCGATTGCTTCCTCATGGACTGAATTCGTGTGACATGGAGCCTTCTAGTCATCAATCTCCTAATGGATCTCTCCCACCCCAAAATACCAAGGGTGCAAATAAAATGGGATATAAACCATCAGGATATTTGAAAGTGAAGGGAGAGATAGAACATGCTGCTATTACTGCTGTTAAAAAGCAGTTAGGAAGGAATTATCGGGAAGATGGTCCACTACTTAGTGTTGAATTTGATACAATTCCTCCAGAGGCATTTGAATGTCAAAGTGCAAATACTGCTAATGAAGTATACTATGCTGCAAATCCTGCTCTTCCAAATTCTCCAGAAGTCTTGGCTGTGAAAAAGCAGTCCAGTCTTAGCTCTAGATATGATTCCTATTTTACCAAATTGAGTTCCCAAGATTCACATATGGAAGGTGACTTTGGCTACCTGCATGATTCTGATTTCCAGGATAGGAAACTCCGGAAGAATACAAATCAAAGACCAACTTTTCACCATTTTACCAATCCTTTGCCTGTGAAGAACTCTTCCCTGGATTTGTATGTAGGCTCTACTGGGGAAGCATCTGCTTATAATAGCACTAAAAATCATAGAATGGGTACTAAGCATGGTTTTGAGGGCATGAGGTCTGATTCTGCTTCTAACCCTAGTGATCATTATGAAGACAATAACCTTGCTGTTAAGCAGACAGATTCACTGCTACATGGCTATCATAACAGCCATCTGAAGAATGTACAAAGGAATGAATATGTAAAATCTAAGCCTTCAAATTTGCTACATAAGTCTCAAATTTACTTGGATAATGAAGAAAGAGGGATTAACAAAAGAATGGCAAAGGAAGAGAAGTTTAATGGGGATAGAAAGTTAAAAAAACAATATTATGATCCAGATGGAGTTAGGGTGCTTTCGAATGAAAAGATGATTGCAAAGCGAGCTAAAGTTGATCCATTTGAACCATATGATGTTAAACAAGCAACTGTTCCTGAGCGGGAACCAAGAAAAAGTCTGCTGCAGAAATGCCATCTAGCTTTAGTGAGGATGAAACTGCAGAAATTCCTCAGTGGACTAACTGTTGTTGACAGATGATAAAAATTTGCACGTCTCTCTAAACCATTGGTGTTGTACAGTGTAAAAAGACAGATCCATTTTGCAAAGTAACATCTAGAAAGACACTAACATGACTAACTTGATTTAGTGTTATGTTTGGCTATTTGCTTTGTATCAAAAGAAACCCCACTCCCTACCCCTTTTCTTTAAATTTTGGATGTAAAATCTCATTTTCCTGCCGCTGCTTTGTGGTAGGAGGGATCCAAACGCAGTTTATAGTTATACACGTC 2214 0.3826 MEEATELQSEEKRFSNEKNKKRRLKTPAQLKALENFYSDNNYPTEEMKSELAHELELTEKQISGWFCHRRLKEKKMLDDEVCTNGRQDRSSGVIQDRGSGLVQDSCGSTKHVDYRYLEPKEVESQGLYNHELSAADMTYGHKNLRYTENDSATDNTSSESRSSLQDRLLPHGLNSCDMEPSSHQSPNGSLPPQNTKGANKMGYKPSGYLKVKGEIEHAAITAVKKQLGRNYREDGPLLSVEFDTIPPEAFECQSANTANEVYYAANPALPNSPEVLAVKKQSSLSSRYDSYFTKLSSQDSHMEGDFGYLHDSDFQDRKLRKNTNQRPTFHHFTNPLPVKNSSLDLYVGSTGEASAYNSTKNHRMGTKHGFEGMRSDSASNPSDHYEDNNLAVKQTDSLLHGYHNSHLKNVQRNEYVKSKPSNLLHKSQIYLDNEERGINKRMAKEEKFNGDRKLKKQYYDPDGVRVLSNEKMIAKRAKVDPFEPYDVKQATVPEREPRKSLLQKCHLALVRMKLQKFLSGLTVVDR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00980 526 CDD homeodomain 20 76 IPR001356 GO:0003677
Pste7g00980 526 MobiDBLite consensus disorder prediction 147 169 - -
Pste7g00980 526 SMART HOX_1 18 80 IPR001356 GO:0003677
Pste7g00980 526 MobiDBLite consensus disorder prediction 177 200 - -
Pste7g00980 526 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 502 - -
Pste7g00980 526 Gene3D - 14 81 - -
Pste7g00980 526 MobiDBLite consensus disorder prediction 86 105 - -
Pste7g00980 526 MobiDBLite consensus disorder prediction 83 105 - -
Pste7g00980 526 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Pste7g00980 526 MobiDBLite consensus disorder prediction 147 202 - -
Pste7g00980 526 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Pste7g00980 526 SUPERFAMILY Homeodomain-like 16 78 IPR009057 -
Pste7g00980 526 MobiDBLite consensus disorder prediction 1 23 - -
Pste7g00980 526 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00980 Pste-Chr7 9061876 9067765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00980 3 280 Homeobox Transcription Factor Family AT4G03250 48.746 1.02e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pste7g00980 Homeodomain 4e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00980 7 9061876 9067765 Pste7g00980 7 9061876 9067765 ECH
Pste7g00980 7 9061876 9067765 Pste8g00677 8 3534697 3548540 PCT