Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00964 AGATGGAAGAGAGAAATGATAATGGTGAGAAACTAGATGAGGTTATGCTACCAGGTTTCAGGTTTCATCCAACAGATGAGGAGCTTGTTGGATTTTACCTAAAGAGAAAGATTCAGCAGAGACCTCTCTCTATTGAGCTCATCAAACAGCTTGATATCTACAAGTATGATCCCTGGGATCTTCCAAAGTTAGCAACCACTGGGGAGAAAGAGTGGTATTTCTACTGCCCCAGAGACAGAAAGTACAGGAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCTACAGGGACTGATCGCCCTATTTATGCCTCAGAGGGTTCAAAGTGTATTGGCCTAAAAAAATCTCTAGTGTTCTACAAAGGTAGAGCTGCCAAAGGAATCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCAGTACTCACTCATCCTCATCCCCCAAGAAGTTCTTGGACAAGACCATTCCTGTTAATGAATCATGGGCAATCTGCAGGATCTTCAAGAAAACCAAGGCAACAGCTCAAAGAGCTCTCTCTCATTCTTGGGTCTCACCTTTACCTGAAACCACAACTTCTGATCATATGCCAACCACTGATGACAGAGATCACTACAACCAATTTTCTCCATCAAACATGCCACCGACAAAGAAAACAAACCCAAGCAACCACTTTTGCACTTTCAATCACAATCACACACAACACTCAACCACTACTAGCACCACTCCTTGTCCTTTAGATGCTGTATCCTCTTATATCAGACCAATTATCAATCCGTTAATGCTTTACAAACCCTTAGATAGGTTACCAATTTCAAATGGAGACCTCAGTAGTAACTTGGTATTTTCATCTCCACTTGAAACTTCAACAACCAATATTGCTAATAAACCTTCAGTGGATGTTTCTTCCTTGCTATTGAGCACATCATCTAATTCTGTGCTTGAAGATTTTAGTAAGACCTCTGAGGGAACAACCACAAACTTTGGTGTGTTACAAGAGCATAGCAATGGCTACCAAATACCATTACTACGTGACATGCAAGGAAACTTTGGTAACCATGATGAGAACGTGTTGGTAAAGATTCCTAATGTGAATAATGTGCCTCGTGTTGGTGACCAACAATTGGAGAGTGTGCGATCCATTGGGTTTCCATTTAGTATGGTTGATGCATGGAAGTCAAATATGCTTTGGGATACTTCCTCTTTGTCCTTG 1229 0.415 MEERNDNGEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYASEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLSTHSSSSPKKFLDKTIPVNESWAICRIFKKTKATAQRALSHSWVSPLPETTTSDHMPTTDDRDHYNQFSPSNMPPTKKTNPSNHFCTFNHNHTQHSTTTSTTPCPLDAVSSYIRPIINPLMLYKPLDRLPISNGDLSSNLVFSSPLETSTTNIANKPSVDVSSLLLSTSSNSVLEDFSKTSEGTTTNFGVLQEHSNGYQIPLLRDMQGNFGNHDENVLVKIPNVNNVPRVGDQQLESVRSIGFPFSMVDAWKSNMLWDTSSLSL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00964 409 SUPERFAMILY NAC domain 14 175 IPR036093 GO:0003677|GO:0006355
Pste7g00964 409 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Pste7g00964 409 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 236 - -
Pste7g00964 409 FunFam NAC domain-containing protein 35 24 178 - -
Pste7g00964 409 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Pste7g00964 409 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00964 Pste-Chr7 8934060 8936510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00964 1 319 NAC Transcription Factor Family AT1G26870 56.535 3.24e-113 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste7g00964 NAM 1.1e-36 No_clan