Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00957 ATAGAACAGCTATTGGTGGTAATAACTGGAATAAATATATTTTGGCACCCAAAACGGAGACCAGAGACGCAGCTTTATTACCCTTGTTTTGTTAAAAGCGTGGGAGCAGAGAAGAAGAAGAAGATGATGATGACGTGGGCAGTCAGTTGGTGCCGTTCCTCAAACCTCAACGCATTCCAAAAAAATAAAATAGAGAATGTAAAAAGTATGTGTAATTATCGTTATACACCCATTAAATATGCGCACGAAGCACCAGCACTCCTTCTCCGCTTCTTGCTAGTGTGCACCCTTGTTGCCTTACGTGCGCCGGTTGCGCAACCCCCAATCGTGCGCATCCCCACCCACCTCATCGAAACTAACACCACCACAACCGTCCACCAGCGCCACAGAACCCAGATCTCGGCTGCCAATCGCTCACCCATGTCTAAAGCGCGTGTCTACACCGATGCCAACGTTCTTCGCCCCAAAGATTACTGGGATTATGAATCTCTCACCGTTCAATGGGGTGATCAGGATGACTATGAGGTTGTGCGAAAAGTTGGAAGGGGGAAGTACAGTGAGGTTTTTGAAGGCATAAATGTTAATAGCAATGAGCGCTGTATAATCAAGATTCTCAAGCCTCATCCTGAATTTGCAAATCCTATCATGAAAATTGTTAGTGGTAATAGTACTCAAAACTTCATTCCAACTGGTGATATTAAAAGAGAGATAAAAATACTTCAGAACCTCTGTGGGGGCCCAAATATTGTCAAGCTTCTTGATATTGTTAGAGATCAACACTCTAAAACGCCTAGCTTAATATTTGAGTATGTCAACAGTACAGATTTTAAAGTCTTGTATCCAACCTTGACTGATTATGACATACGCTACTACATATATGAGCTTCTTAAGGCCTTAGATTACTGCCATTCTCAAGGCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGATCATGAACTACGAAAACTTCGCTTGATAGATTGGGGCCTTGCTGAATTTTATCATCCTGGAAAGGAATACAATGTTCGTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGATTTGCAAGACTATGACTATTCATTAGACATGTGGAGTCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCTTTCTTTTATGGTCACGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTGCTTGGAACCGATGAACTGAATGCATATCTGAATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTAGTTGGAAGGCACAGCCGCAAGCCTTGGTCTAAATTTATCAATGCAGATAACCAACATCTTGTGTCTCCTGAGGCTATTGATTTTCTTGATAAGCTCCTTCGATACGATCACCAGGACAGGCTAACGGCTAGAGAAGCTATGGCACATCCATATTTCTCTCAAGTAAGGGCTGCCGAAAGCAGTAGAATGAGGACACAG 1479 0.4239 IEQLLVVITGINIFWHPKRRPETQLYYPCFVKSVGAEKKKKMMMTWAVSWCRSSNLNAFQKNKIENVKSMCNYRYTPIKYAHEAPALLLRFLLVCTLVALRAPVAQPPIVRIPTHLIETNTTTTVHQRHRTQISAANRSPMSKARVYTDANVLRPKDYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPHPEFANPIMKIVSGNSTQNFIPTGDIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRTQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00957 493 FunFam Casein kinase II subunit alpha 223 270 - -
Pste7g00957 493 Gene3D Phosphorylase Kinase; domain 1 165 270 - -
Pste7g00957 493 FunFam Casein kinase II subunit alpha 160 221 - -
Pste7g00957 493 PANTHER CASEIN KINASE II SUBUNIT ALPHA 119 489 IPR045216 GO:0004674|GO:0006468
Pste7g00957 493 SMART serkin_6 174 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00957 493 Gene3D Transferase(Phosphotransferase) domain 1 271 480 - -
Pste7g00957 493 FunFam Casein kinase II subunit alpha 271 482 - -
Pste7g00957 493 ProSiteProfiles Protein kinase domain profile. 174 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00957 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Pste7g00957 493 SUPERFAMILY Protein kinase-like (PK-like) 142 483 IPR011009 -
Pste7g00957 493 Pfam Protein kinase domain 174 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00957 493 ProSitePatterns Protein kinases ATP-binding region signature. 180 203 IPR017441 GO:0005524
Pste7g00957 493 CDD STKc_CK2_alpha 155 479 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00957 Pste-Chr7 8879748 8887599 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00957 172 482 Core Cell Cycle Gene Families AT1G76540 28.349 1.43e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Pste7g00957 Pkinase 5.1e-62 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00957 7 8879748 8887599 Pste7g00957 7 8879748 8887599 ECH