Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00954 TATGTAATTGTCGTTAAACACATTAAATATGCCCAGGAAGCACCAGCAATACTTCTCGGCTTCTTGCTAGTGTGCACCTTGTTGCCTTGCGTGCGCCTGTTGCGCAATCCCCCTATCGTGCGCATCCCCACCGACCTCATCGAAACTAACACCACCACAATCGTTCACCAGCGCCACAGAACCCAGATCTCGGCTTCCAATCGCCCACCCATGTCTAAAGCGCGTGTCTACACCGATGTAAATGTTCTTCGCCCCAAAGAGTACTGGGATTATGAATCTCTCACCGTTCAATGGGGTGACCAGGATGACTATGAGGTTGTGCGAAAAGTTGGAAGGGGGAAGTATAGTGAGGTTTTTGAAGGCATAAATGTTAATAGCAATGAGCGCTGTATAATTAAGATTCTCAAGCCTGTCAAGAAAAAGAAGATTAAAAGGGAGATAAAAATACTTCAGAACCTTTGTGGGGGACCAAATATTGTCAAGCTTCTTGATATTGTTAGAGATCAACATTCCAAAACTCCTAGCTTAATATTTGAATATGTCAACAGTACAGATTTTAAAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTACTACATATATGAGCTTCTTAAGGCCTTAGATTACTGCCATTCTCAAGGCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGATCATGAATTACGGAAACTTCGCTTGATAGATTGGGGCCTTGCTGAATTTTATCATCCTGGAAAGGAATACAATGTTCGTGTGGCTTCAAGATACTTTAAGGGCCCTGAACTTCTAGTTGATTTGCAAGACTATGACTATTCATTAGACATGTGGAGTCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCTTTCTTTTATGGTCACGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTGCTTGGAACGGATGAACTGAATGCATATCTGAATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTGGTTGGAAGCCGCAATAGTATTACTGTTTTTACACTTCCGGTGGCAATCAAATATGCACTGGTTGATCCAGTAATACTGCAAAAGGTAAACCGAACGTGCTACAGTAATACTGTTTTTGCACTTTATGCACAGCCGCAAGCCTTGCTCCTTCGATACGATCACCAGGACAGGTTAACGGCTAGAGAAGCTATGACACATCCATATTTCTCCCAAGTAAGGGCTGCTGAAAGTAGCAGAATGAGGACACAG 1260 0.423 YVIVVKHIKYAQEAPAILLGFLLVCTLLPCVRLLRNPPIVRIPTDLIETNTTTIVHQRHRTQISASNRPPMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGSRNSITVFTLPVAIKYALVDPVILQKVNRTCYSNTVFALYAQPQALLLRYDHQDRLTAREAMTHPYFSQVRAAESSRMRTQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00954 420 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Pste7g00954 420 Gene3D Transferase(Phosphotransferase) domain 1 181 406 - -
Pste7g00954 420 Gene3D Phosphorylase Kinase; domain 1 104 180 - -
Pste7g00954 420 ProSiteProfiles Protein kinase domain profile. 104 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00954 420 Pfam Protein kinase domain 104 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00954 420 SMART serkin_6 104 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00954 420 FunFam Casein kinase II subunit alpha 90 180 - -
Pste7g00954 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Pste7g00954 420 SUPERFAMILY Protein kinase-like (PK-like) 72 410 IPR011009 -
Pste7g00954 420 FunFam Casein kinase II subunit alpha 181 409 - -
Pste7g00954 420 PANTHER CASEIN KINASE II SUBUNIT ALPHA 49 416 IPR045216 GO:0004674|GO:0006468
Pste7g00954 420 CDD STKc_CK2_alpha 85 406 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00954 Pste-Chr7 8844798 8854595 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00954 110 409 Core Cell Cycle Gene Families AT1G73690 29.167 2.15e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Pste7g00954 Pkinase 2.5e-59 CL0016