Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00938 ATGGCAAAGGTACCCACTGCCACTCCCAGTCAGTCCATGACGCAATTCACCCCCTCTATGCACCAAATCCCCAATAACCCTACTACCATTACCATTACCATGAACAAAAACCAAATCCCTAGGCCTAGGCCTTGGCCACCAGGCTTCCCTACCTCCAAGGCCCTATCCAACTTCGGCGACGCCAACTGCATGGAACAGTTACTCGTCCACTGTGCCAACGCCATCCAAACCAACGACGTAACCCTCGCCCAGCAGATCCTATGGGTCCTCAACAACATCGCTCCCCCCGACGGCGACTCCAACCAGCGCCTCGCCTCCACCTTCCTCCGCGCCCTCACCTCACGTGCCGCCAAATCCGGCTCCTGCAACATGCTCGTCTCCGTTGCCCACCAAACCCCTTCCATCCACACCCACACCCACAATTTCTCCCTCATCGAGCTCGCTAACTTCGTCGACCTTACCCCCTGGCACCGCTTCGGCTTCACCGCCGCCAACTCCGCCATTCTCGAAGCCACCGATGGCTTCTCCGTCATCCACATCGTCGACCTTAGCCTCACTCATTGCATGCAGATTCCCACCCTCATCGACGCCATCGCCACCCGCCACGACGTCCCTCCTCTCATCAAACTCACCGTCGCCGATTCCTCCTCCCAACACATCCCTCCTATGCTCAACCTCTCCTACCACGAACTCGGCTCCAAGTTGGTCAATTTCGCTAGCTCCAGAAACCTCGTCATGGAATTTAGAGTCGTTTCTTCCGCTTTCCAAGACGGCTTCGCGGATTTGATCCAACACTTAAGAGTGCAACAACAACAACATCATTTGGTTTATTCTACCGAACCTCGTCTCTCCGAGGCTTTGGTTATAAACTGTCACATGATGCTTCATTACATCCCCGACGAAACCCTATCCTCGATTCCTGAAACAGACTTAACCTCTTTTCTCTACGACGCTTCTTCTGGGCCTTCTTCCGTTATCACTTCAACCTCCTCCCTAAGATCGCTGTTCCTCAAGTCCCTGCGCTCTTTGGACCCCACGGTTGTCATTTTGGTTGATGAAGACGCCGATTTGACATCCAATAACCTGGTTTGCCGACTGAGATCTGCGTTTAACTACCTATGGATACCTTATGACACTGTCGACACGTTCTTGGCCCGAGGGAGCAAGCAAAGGCAATGGTACGAAGCAGACATATGCTGGAAGATTCAGAACGTGATAGCGCATGAAGGGGTTCAGAGAGTGGAGAGGGTTGAGCCTAAGAACAGGTGGGAGCAGCGAATGAAGAACGCCAATTTTCAAGGGGTCCCTTTCAGTGAGGACACTGTTACGGAGGTGAAGGCAATGCTGGATGAACATGCTGCCGGGTGGGGATTGAAGAAGGAAGATGAACACATTGTGCTCACTTGGAAAGGACACAACGTGGTCTTTGCTTCCGCTTGGTTCCCTGCTTGA 1452 0.5324 MAKVPTATPSQSMTQFTPSMHQIPNNPTTITITMNKNQIPRPRPWPPGFPTSKALSNFGDANCMEQLLVHCANAIQTNDVTLAQQILWVLNNIAPPDGDSNQRLASTFLRALTSRAAKSGSCNMLVSVAHQTPSIHTHTHNFSLIELANFVDLTPWHRFGFTAANSAILEATDGFSVIHIVDLSLTHCMQIPTLIDAIATRHDVPPLIKLTVADSSSQHIPPMLNLSYHELGSKLVNFASSRNLVMEFRVVSSAFQDGFADLIQHLRVQQQQHHLVYSTEPRLSEALVINCHMMLHYIPDETLSSIPETDLTSFLYDASSGPSSVITSTSSLRSLFLKSLRSLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLARGSKQRQWYEADICWKIQNVIAHEGVQRVERVEPKNRWEQRMKNANFQGVPFSEDTVTEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWFPA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00938 483 ProSiteProfiles GRAS family profile. 55 481 IPR005202 -
Pste7g00938 483 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 63 470 IPR005202 -
Pste7g00938 483 Pfam GRAS domain family 64 480 IPR005202 -
Pste7g00938 483 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00938 Pste-Chr7 8706623 8708147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00938 46 482 GRAS Transcription Factor Family AT3G49950 58.503 2.73e-179 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste7g00938 GRAS 1.8e-91 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00938 7 8706623 8708147 Pste7g00938 7 8706623 8708147 ECH