Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00932 CTGTGTTCATAAAAACGTAAACAAACACACCCTGGGTTCGTTTATTTGATTGATTTTACAGTAACAAAATAGGCATGAGTTGCAACGGCTGCCGCGTTCTTCGAAAGGGCTGCAGCGAATCCTGTGTTTTGCGCCCTTGTTTGCAGTGGATCGACACCGCTGAAGCCCAAGGCCATGCCACCGTCTTCGTAGCCAAGTTCTTTGGCCGTGCCGGCCTCATGTCCTTCATTTCCAACGTTCCACATAATCAAAGACCTGCTCTGTTTCAGTCTCTGCTCTTCGAAGCCTGCGGGAGAACGGTGAACCCCGTCAACGGCGCCGTCGGCCTTCTCTGGACCGGAAACTGGCACGTGTGCCAGGCCGCTGTGGAGACCGTGCTCCGCGGCGGCACCTTGAGGCCCATGCCCGACCTTATGGCTCTCGACGTTGCCACCGATGAAGCATCGGAGGCGGAAGGCGCCGACATTTGGCGGATCCGACACCCCAACCCGACTTGCCGCTTCACAGGCTCGCGATCTCATAATAAAATCTCCTCCGCCGGAGTAAAACGCAAGCGTTCTGAGGAAGTCTCGAAGCTTCAAACAGCGCCGAATCTGGATCTCCGGTTGACGCCGATTTTTTTGCAGAAGGCGGAGAGTCCGCGGCCGGAGTCTCCCTCGATGACCTCGGAGGAGTCCGGCACGACGACGGCGTGTCTGGAGAGCAGATTCGGGGAGCAGGGCCGAGACCGGAAAGTTCTCAACCTTTTCCTTTGAGAACTCTCCCTGCGTGAGCGTTATGTTTTTGTGAACCTAAAAGAAGGAGTTTTTAGTTTGTGGTGGCATGTGTAATAGTGGTTGAAGGGGTTCTTCCCGGTTTTGAAGTCCGGCGAGTTTTGGTGAGACACCGGCACAGGATTTCTCTAGAGAGAAAAATGAGGGTTCGTCGGTGATCCCTTCTTTGTTTTTGTTTTTGTTTTTTTTTTTAATCCCTGTCAAACTTGGAATATGTAAGCAGTCCTGTGATCGTGGGACGTGAATATTAATTAAATATGAATAAAGAC 1042 0.5221 MSCNGCRVLRKGCSESCVLRPCLQWIDTAEAQGHATVFVAKFFGRAGLMSFISNVPHNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPDLMALDVATDEASEAEGADIWRIRHPNPTCRFTGSRSHNKISSAGVKRKRSEEVSKLQTAPNLDLRLTPIFLQKAESPRPESPSMTSEESGTTTACLESRFGEQGRDRKVLNLFL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00932 226 MobiDBLite consensus disorder prediction 190 210 - -
Pste7g00932 226 MobiDBLite consensus disorder prediction 184 212 - -
Pste7g00932 226 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pste7g00932 226 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Pste7g00932 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00932 Pste-Chr7 8656520 8657664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00932 1 226 AS2 family AT4G37540 58.130 3.25e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste7g00932 LOB 1.7e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02119 1 6706244 6707290 Pste7g00932 7 8656520 8657664 ECH
Pste7g00932 7 8656520 8657664 Pste7g00932 7 8656520 8657664 ECH
Pste7g00932 7 8656520 8657664 Pste1g02119 1 6706244 6707290 PCT