Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00931 CTCAGATTTCAGTTGCTGACGTGGCATTAACCGGCAGAAAAAACAGTTAGCTCCTCTCACGAGAGAGAGAGAGAGAGAGAGACAACCTCTTTCGCGTGCGTGCTTCCGCGTGTTACCAAAAATTTCAAACGAAGCTCCGCGAATTCGAGCTCAGACCCAAACGCATTGTCTCTCCCCAACGCTTTCTCCTCGCACCACCACCGTTCCGTTCTCCCAATCCCCTTCGCCGCGCTTCCAACGACCCCGTTTTCTCCCAAAACGGTTAGGTTTTCCGCGCTCTCCTCGGATTCCTCGCAATGTCGCCGGCTCCGGTTCCCGCCGTGCCGCTCTGCGCCGCATTGCCGCGCCGCTAGGCATATTTCGAGGGTTCCGCGGCGGAAGCGTTTTCTAGGGTTTCGTTCGAGCCGGAAGTGGTGACCGGAGCGAGCGGAGGCGGATTTTTATGAACCCTGATCTGCGGTGCCGTTCAGCTATGGGGTAGACCAATGTAGCTTCTGTTTGTTCATTTGGAAGCGCTGAAATCGGGTTTCATGGGGAGAGGTTGGACGTTCCTTTATGGTATATGCTTTGTTTTGAGTCGTTGTTCAAATGGGTATTGGGTCCATTCTTCGGAAGCGCGTCTTATTGCAACTTGAATGGCTGATCCTCAGAAAACTGCTCCTGGCGAGAGAGATATTGAGCAGGCAATTACATCTCTTAAGAAAGGCTCATATCTGCTGAAGTATGGGCGAAGAGGCAAGCCAAAGTTCTGCCCATTTAGGCTTTCCAATGATGAGTCTCTACTCTTATGGTACTCTGGGAAGGAAGAGAAACAGCTTAAGCTCAGTATGGTTTCAAGGATCATTCCAGGGCAGAGAACTGCAACATTTCAGCGGTATCCACGGCCTGAAAAGGAATATCAATCATTTTCTCTTATATACAATGATAGGTCCTTGGATTTGATATGCAAGGACAAAGATGAAGCTGAAATCTGGTTTGTTGGTCTTAAGGCATTAGTTACTCGAAGTAACAATCGCAAGTGGAGATTTCAATCAAGAACTGACCGCAGTCCATATTCTGATAGTCCAAAATCTAGCACACAAAGATCCACTCCATCAATTACACCATTTTCTGAACCCGGTGATGCTGGTGGAGGTGCTTTTGATGTGCATAATAGATGGGTAAAGGCTTTCTCTGAAATAATTTCTTACACTGCAGCTAGCAAGAGTCCCAGTCAAGCTGAATCAATTGCAAATTCCTCTTTATCCTCCGGGTCTGTGGATAACTCAAGCAACCGAAATTCTGCATCTGAGGCATTTCGAGTTAGTTTATCTAGTGCTGTAAGTTCCTCCAGCCAGGGTTCTTATCAGGAAGATATTGATGCCCTAGGTGATGTTTTTATTTGGGGAGAAGGCATTGGTGATGGAATTCTTGGTGGTGGTGTACATAGAGTTGGAGCCTTATCTTGTTCAGAGATGGATGCATTCCTTCCCAAGCCATTGGAATCAAAGTTAGTTCTAGATGTTCACAGTATTGGTTGTGGATACAGACATGCTGTTCTGGTTACCAAGCAGGGAGAGATATTTAGTTGGGGAGAGGAATCGGGAGGTAGGCTTGGACATGGTGTAGAGATGGATGTTTTCCACCCTAAGCTCATTGACACTCTTGGTAGCATAAATGTTGAGTTAGTAGCATGTGGAGAATATCATACTTGCGCTGTTACTTATTCTGGTGATCTTTATACATGGGGTGATGGTACCCACAATTCTGGTATGCTCGGACATGGAAATGAAGTAAGTCACTGGATTCCTAAGAAAGTAGGTGGTGCCTTGGAGGGTTTACGTGTATCTTATGTGTCCTGTGGACCTTGGCACACAGCTATTGTTACGTCAGCTGGGCAGTTGTTCACATTTGGCGATGGAACTTTTGGTGCCTTAGGGCATGGAGATCTTAGTGGCACTAATATTCCTCGGGAAGTAGAAACTTTTAAAGGGTTGAGAACAACCAGGGTTGCCTGTGGTGTTTGGCACACTGCTGCAGTTGTTGAGGTGGTAAATGAATATGTGGAATCTTCTACACAGTCATCTAGTGGAAGATTGTTCACCTGGGGTGATGGAGATAAAAGCCAACTTGGACATGCTGATAGGGAACCTAGACTAGTTCCCCAGTGTGTCATTTCCTTGAGTACTGAAAACATCTGCCGAGTGGCTTGTGGCCACAGTCTTACAATTGCTTTGACAACAGCAGGACGTGTCTACACAATGGGAAGTACTGCTTATGGACAACTTGGCTGTCCTGCATCTGATGGGAAAGTCCCTACGTGTGTTGAAGATAAAATTGCTGACAGTTTTGTTGAGGACATTGCCTGTGGTTCATATCATGTTGCAGTCCTGACTTCCAAGGCCGAGGTTTACACATGGGGAAAGGGTTTGAATGGGCAATTAGGTCATGGAGACAATGATCACAGGAATAAACCCACCCTTGTTGAGTTTTTAAAAGATAAACAAGTGAAAAGTGTTTTTTGCGGTTCAAACTTTACTGCTGTTGTATGTCTTCATAAATGGATACCAAGTGTTGATCAGTCTACATGTTTTGGATGTCGTAATCCTTTTAATTTCAGAAGGAAACGTCATAATTGTTACAACTGTGGACTTGTGTTTTGCAAAGCATGCACCAGCAAGAAATCTATAAAAGCTTCGCTTGCTCCCAATTCCTACAAATCATATCGAGTTTGTGATGACTGTTATCTTAAACTTAAGAAAGCTGCTGTGTCACTACCCTTGGTGCAAACTCCTAGCTTGAGAAGTGTAAGTTTGCCACCAGACAATAAAGCCACTAAAATACAGGGAGCACTATTGAGGCTTTCATCTTTTGGTTCTATTCTTCAAACAGAAAGTAGTCAATCAAAGCTTCCAGATTCACAAGATAGCCATCATCTCCCAGCTTCAAATGGAAAACTACAGATGAGGGCTTCTGTTCCTTCAAAATCATCAAATTTTCTTTCTGTGGATTCTAAGAAATACCCTTCAGTTTCTGAGACTGCTGCAAGAATATCTTGTCAATCATCATCTCCAGTTTCATCAAAGTCAAGTCCAAGACAATCATATGAAGATATTAATGACGATTTAAAGCACAAAAATGATATTTTAAGTCAAGAAGTTATCAGTTTAAGGACACAGGTTGAAGATCTTATTCATAAATCAAGAAGTTTAGAGGCTGAACTTGATAGGACATCAAAGCAATTGAAGGAAGTGACTGCAGTAGCTGCAGATGAAGCTGGAAAGTGTAAATCTGCAAAAGAGGTTATAAAGTCATTGACTTTACAGTTGAAGGAAATGGTGGAAAGACAGCCAAAACAACATAATGCTGACTCCAGTACAGAGCCCTATGTTGAAACCAATAATAGTACTCTAGATCATTCCTTAGATGAGAGCCGCATAAGAAACACTGTCATTTCCAACAGTGAAAGCACCAGCAATGTAGCAAATCTGATATTACCTAATGGAGGAAAGGCAGAGTGGGTTGTGCAAGATGAACAAGGTGTATATGTGAGTTTGTCCTCACTGCCAGGTGGTGGTAATGAGCTAAAGCGTGTTCGCTTCAGGAAGGTTGAGGTATTGATGTATGACAATGATCATCTTGCTGTTTGGATTGTTTATACAAAGGTGTATTTCCAGGTTAAGGGGACTTCTCCAGGCATGAAGTCGCTACTTAATGAACAAACACAGTTGACTTGGGAGCAGCTTAAGAGTGAGTTGTTGGAGTGCTACAGAGGCATATGTGAGGGTGACATTTTCAAAGGAAATTGCATCCGCTTATCTTTGTCCAACACACCTTATGGCTCGAGTCAGGGATTAGGGACCGATATGAGAAATGAAAAGGGTTGTGCTACAAGTGTGGTGGTTCTTGCTACCTCCACCAATAATGCCTCGAGTGTGATGTTATTAGAAGAAGAGGATGAGAATGGCGAGACAAACATTGTTATGGTCGGAGATATAAGTCGAAAACATTTCACTGAGGAACAAGCTGAAAAGTGGTGGGCTGAGAATGGAACCAAAATATTGGAGCGGCACAATATAGTTGCTTTATAA 4070 0.4364 MADPQKTAPGERDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLKLSMVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEIWFVGLKALVTRSNNRKWRFQSRTDRSPYSDSPKSSTQRSTPSITPFSEPGDAGGGAFDVHNRWVKAFSEIISYTAASKSPSQAESIANSSLSSGSVDNSSNRNSASEAFRVSLSSAVSSSSQGSYQEDIDALGDVFIWGEGIGDGILGGGVHRVGALSCSEMDAFLPKPLESKLVLDVHSIGCGYRHAVLVTKQGEIFSWGEESGGRLGHGVEMDVFHPKLIDTLGSINVELVACGEYHTCAVTYSGDLYTWGDGTHNSGMLGHGNEVSHWIPKKVGGALEGLRVSYVSCGPWHTAIVTSAGQLFTFGDGTFGALGHGDLSGTNIPREVETFKGLRTTRVACGVWHTAAVVEVVNEYVESSTQSSSGRLFTWGDGDKSQLGHADREPRLVPQCVISLSTENICRVACGHSLTIALTTAGRVYTMGSTAYGQLGCPASDGKVPTCVEDKIADSFVEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVFCGSNFTAVVCLHKWIPSVDQSTCFGCRNPFNFRRKRHNCYNCGLVFCKACTSKKSIKASLAPNSYKSYRVCDDCYLKLKKAAVSLPLVQTPSLRSVSLPPDNKATKIQGALLRLSSFGSILQTESSQSKLPDSQDSHHLPASNGKLQMRASVPSKSSNFLSVDSKKYPSVSETAARISCQSSSPVSSKSSPRQSYEDINDDLKHKNDILSQEVISLRTQVEDLIHKSRSLEAELDRTSKQLKEVTAVAADEAGKCKSAKEVIKSLTLQLKEMVERQPKQHNADSSTEPYVETNNSTLDHSLDESRIRNTVISNSESTSNVANLILPNGGKAEWVVQDEQGVYVSLSSLPGGGNELKRVRFRKVEVLMYDNDHLAVWIVYTKVYFQVKGTSPGMKSLLNEQTQLTWEQLKSELLECYRGICEGDIFKGNCIRLSLSNTPYGSSQGLGTDMRNEKGCATSVVVLATSTNNASSVMLLEEEDENGETNIVMVGDISRKHFTEEQAEKWWAENGTKILERHNIVAL 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00931 1144 Coils Coil 814 869 - -
Pste7g00931 1144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 647 706 IPR013083 -
Pste7g00931 1144 Gene3D - 13 129 IPR011993 -
Pste7g00931 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 583 634 IPR000408 -
Pste7g00931 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 307 355 IPR000408 -
Pste7g00931 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 478 527 IPR000408 -
Pste7g00931 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 414 462 IPR000408 -
Pste7g00931 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 531 579 IPR000408 -
Pste7g00931 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 358 409 IPR000408 -
Pste7g00931 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 584 631 IPR000408 -
Pste7g00931 1144 MobiDBLite consensus disorder prediction 747 823 - -
Pste7g00931 1144 Pfam Pleckstrin homology domain 15 121 IPR001849 -
Pste7g00931 1144 Gene3D - 472 646 IPR009091 -
Pste7g00931 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 479 530 IPR000408 -
Pste7g00931 1144 PRINTS Chromosome condensation regulator RCC1 signature 416 430 IPR000408 -
Pste7g00931 1144 PRINTS Chromosome condensation regulator RCC1 signature 578 599 IPR000408 -
Pste7g00931 1144 PRINTS Chromosome condensation regulator RCC1 signature 520 538 IPR000408 -
Pste7g00931 1144 PRINTS Chromosome condensation regulator RCC1 signature 359 375 IPR000408 -
Pste7g00931 1144 PRINTS Chromosome condensation regulator RCC1 signature 400 416 IPR000408 -
Pste7g00931 1144 PRINTS Chromosome condensation regulator RCC1 signature 309 325 IPR000408 -
Pste7g00931 1144 Pfam Transcription factor regulating root and shoot growth via Pin3 952 984 IPR013591 -
Pste7g00931 1144 Pfam Transcription factor regulating root and shoot growth via Pin3 1114 1139 IPR013591 -
Pste7g00931 1144 SUPERFAMILY FYVE/PHD zinc finger 635 703 IPR011011 -
Pste7g00931 1144 CDD PH_PLC_plant-like 12 122 - -
Pste7g00931 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 307 358 IPR000408 -
Pste7g00931 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 245 306 IPR000408 -
Pste7g00931 1144 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 293 303 IPR000408 -
Pste7g00931 1144 MobiDBLite consensus disorder prediction 132 163 - -
Pste7g00931 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 359 413 IPR000408 -
Pste7g00931 1144 SUPERFAMILY PH domain-like 13 121 - -
Pste7g00931 1144 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 639 701 IPR017455 -
Pste7g00931 1144 Coils Coil 877 897 - -
Pste7g00931 1144 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 57 893 - -
Pste7g00931 1144 CDD FYVE_like_SF 644 697 - -
Pste7g00931 1144 FunFam PH, RCC1 and FYVE domains-containing protein 1 216 467 - -
Pste7g00931 1144 SUPERFAMILY RCC1/BLIP-II 243 636 IPR009091 -
Pste7g00931 1144 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 452 462 IPR000408 -
Pste7g00931 1144 MobiDBLite consensus disorder prediction 747 815 - -
Pste7g00931 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 531 582 IPR000408 -
Pste7g00931 1144 Pfam Transcription factor BRX N-terminal domain 872 897 IPR027988 -
Pste7g00931 1144 ProSiteProfiles BRX domain profile. 953 1011 IPR013591 -
Pste7g00931 1144 MobiDBLite consensus disorder prediction 136 158 - -
Pste7g00931 1144 Gene3D - 370 469 IPR009091 -
Pste7g00931 1144 Gene3D - 181 369 IPR009091 -
Pste7g00931 1144 Pfam FYVE zinc finger 635 701 IPR000306 GO:0046872
Pste7g00931 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 414 465 IPR000408 -
Pste7g00931 1144 SMART fyve_4 631 702 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00931 Pste-Chr7 8641450 8656063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00931 874 1135 Major Intrinsic Protein MIP AT1G31880 22.981 8.48e-09 57.0