Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00927 AGGGTTTGAAAATTGCGTCGGATGGCGCATCAAAGGGCTTCTTTTCCACTGCAACTTTTATTTGCAATTTAATGGCCCTAAGGCCCTTCCAATTCAACTTCTCGCGCGATAGATTGCTCTTTCTCCTCCGCTCTTCCCTTTCTCATTCCCATCCCTCTCCCGCTCCCGCTACCGCTCCCGCTTTCCCCTTCCGCCACTTCTCCGCCTCCTCTCTCGCCCGCCCTCCGCCGCCTCCCCCCCTCGACGCCATGGCCCAGAAAATCGCAAAGTCCACGCGCCGCCCCGGCGCCTCCTCCAAGGCCAGGGTTTACGCCGACGTCAACGTTGTTCGCCCCAAGGAATATTGGGACTACGAGTCCCTCAGCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGTAGGGGCAAATACAGTGAGGTGTTTGAAGGCGTTCACTGCACGGACGGTGAGAAATGCGTCATCAAGATCCTGAAACCCGTTAAGAAGAAGAAGATCAAGAGAGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCTAATATTGTGAAGTTGCTTGACATTGTTAGAGACCAGCAGTCAAAGACCCCAAGTCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTATCCTACATTGTCAGACTATGATATACGATATTATATTTATGAACTTCTGAAGGCACTTGATTATTGCCATTCACAAGGAATCATGCATCGGGATGTGAAACCACATAATGTAATGATTGATCATGAGCAGCGTAAGCTTCGCCTTATTGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAGGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGGATGATATTCCGTAAGGAACCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCTAAGGTACTTGGAACAGATGAATTAAGTGCATATTTGGACAAGTATCGAATAGAGTTGGACCCACATCTTGGAACACTTATTGGGAGGCATACCCGCAAGCCATGGGCAAAGTTTATTAACGTTGAAAATCATCACTTGGCTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTACGTTATGATCACCAAGAACGTCCCACTGCAAAAGAAGCCATGGCCCATCCATATTTCAATCCAGTTAGAAATGCAGAAAGTAGCAGAACTCGTACACATTGAATTGCTGGTGATTGAGATATGGTATTCGTTGTTGGCAAGGGGGCCTTCAACATCTGAACTGTTATTTGTGGTGGAACTTGATTTTAGGAGATTCTGCCCTTGCTTTGTTGTAAAACTCAGTTTAATTAGCTCTTTACCTAATCCGTTTTGTTTCTGCTTTTAAATTTTTTTTGGGTGGAAAATTCAGCAGTTCTCTAAAATTTTATTTGATTGTGTGCCAAATTTGGAATGAAGTCTCGATTCAATTTCAGTTAAAAATTATACCCA 1559 0.4375 MALRPFQFNFSRDRLLFLLRSSLSHSHPSPAPATAPAFPFRHFSASSLARPPPPPPLDAMAQKIAKSTRRPGASSKARVYADVNVVRPKEYWDYESLSVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDGEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLDKYRIELDPHLGTLIGRHTRKPWAKFINVENHHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPVRNAESSRTRTH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00927 406 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Pste7g00927 406 PANTHER CASEIN KINASE II SUBUNIT ALPHA 71 402 IPR045216 GO:0004674|GO:0006468
Pste7g00927 406 ProSiteProfiles Protein kinase domain profile. 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00927 406 SUPERFAMILY Protein kinase-like (PK-like) 78 396 IPR011009 -
Pste7g00927 406 FunFam Casein kinase II subunit alpha 93 183 - -
Pste7g00927 406 Pfam Protein kinase domain 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00927 406 Gene3D Phosphorylase Kinase; domain 1 107 183 - -
Pste7g00927 406 Gene3D Transferase(Phosphotransferase) domain 1 184 392 - -
Pste7g00927 406 MobiDBLite consensus disorder prediction 386 406 - -
Pste7g00927 406 CDD STKc_CK2_alpha 88 392 IPR045216 GO:0004674|GO:0006468
Pste7g00927 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Pste7g00927 406 FunFam Casein kinase II subunit alpha 184 395 - -
Pste7g00927 406 SMART serkin_6 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00927 Pste-Chr7 8606140 8619026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00927 105 393 Core Cell Cycle Gene Families AT1G76540 30.519 9.58e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Pste7g00927 Pkinase 1e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00927 7 8606140 8619026 Pste7g00927 7 8606140 8619026 ECH