Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00916 ATTTAACAACACCTTCCTCACCCCATTCCCTCTCCCATGCACTCACATTAACTCTCTTCCCTCTCCTCATACTTCACTCCTCATCCTATCTCAAAAAACACAACACTTCACTTTTCACTTTCCAATTTTCAATTTTTCATTCCTCACTTATCTTTTAGCTTTCTTTCTCTCATTCTCACTCTGACAAATACTTATCCACTTCATTTTCCGAGGTATATATATAAACAAGTAGCTAGTTAGCTACTTCTATAGGCTCTAGCTAGTAGCTTAGTAGTTAAGTACTTCTTTCTCTTTTCAGAACAAATCAAGAGCTAGCAGCACACAACAGAAAAATATTTCTGACACATTCTTCACCACTCACCATACACCCTTTTAGCTTTAATTAATAACAATGTCTAGCAGAAGATCTCGTTCCAGACAATCTGGTGTTTCCACTGAGATCACCGATGCTCAGATCACTGATCTCGTTGCAAAGTTACGACAATTAATCCCTGAACTAAGCTCAAGGCGCTCTGACAAGGTTTCAGCTTCCAAGGTGTTGCAGGAAACTTGCAACTACATTAAAAACTTGCACAGAGAGGTTGATGATCTTAGTGACCGTTTGTCACAACTTTTGGCCACCACGGACTCCAACAGTGCCCAAGCAGCCATTATTAGGAGCTTACTTATGCAATAATTTTATATTCTAATCTTTTTAATTATAGAGCTTTAATCAATCCTATGTGTCGTGTGCATGTCCATGTTAATTTTTGTTATTTGTCATATCCTCTATTCTGGGTTGTAGGGTTTGGTTTTTAAGACAAAAAAGCAAAAAAGGCCATGTTCGCTCTTACTTAGTTTTATCAGACACTTTGTATTGACTATCATCAAATTGTATTACTATAAATAAAATATGAACTTTGCATCTTCAAGACTTCCATTTAATTACTCTCAACACTTATAATGTGTATATATATAATATAACCAATATATACGTACGTTTGAGTAGTTTTTTTTAGACAAAACAA 1007 0.3555 MSSRRSRSRQSGVSTEITDAQITDLVAKLRQLIPELSSRRSDKVSASKVLQETCNYIKNLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLMQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00916 94 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 82 IPR036638 GO:0046983
Pste7g00916 94 PANTHER TRANSCRIPTION FACTOR PRE 1 93 IPR044293 GO:0006355|GO:0040008|GO:0046983
Pste7g00916 94 CDD bHLH_AtPRE_like 17 77 - -
Pste7g00916 94 FunFam Transcription factor ILI6 7 89 - -
Pste7g00916 94 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 60 IPR011598 GO:0046983
Pste7g00916 94 Gene3D - 4 90 IPR036638 GO:0046983
Pste7g00916 94 Coils Coil 57 77 - -
Pste7g00916 94 Pfam Helix-loop-helix DNA-binding domain 21 60 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00916 Pste-Chr7 8471737 8473370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00916 1 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 71.579 1.52e-38 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00916 HLH 3.7e-06 No_clan