Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00912 ATGGATACCTTGTTTAGGCTAGTAAGTTTTCAGCAGCAACAACCGGATCCATCCCTGAACTCCACCACGAGCAGAACCTCGAGCAGCTCCAGATCCTCCCGCCAAAACTACTATCACTATTCCCATCAAGAAGAAGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACCTATCCTCGTCTTCTTCCAAACACTACTATCCATACCAACAACCCAACGTATCCACCAACACCTTCAGCACAACCGAATACTCATACTCCTTCTCCCCGACACCTCCTGTCCCTGATTTCAACTTCGAATTCTCCCCCAACTGGTCCCACAACCTCCTCCTCCAATCGGCGCAGTCCCTCGCCGACAACAACAGCACGCGCCTCCACCACCTCCTCTGGATGCTCAACGAACTCAGCACCCCCTACGGCGACACTGACCAGAAACTCGCCGCCTATTTCCTCCAAGCCCTCTTCAGCCGCGTCACCGATGCTGGAGACCGAACCTACCGAACCTTAGCCTCCGCCTCCGAGAAAACATGCTCCTTCGAATCCACAAGGAAAACGGTCTTGAAATTCCAGGAAGTCAGCCCCTGGACTACCTTCGGACACGTGGCGTCCAACGGCGCCATCTTAGAAGCCTTAGAGGGAAACCCCAAATTGCACATACTTGACATCAGCAATACCTATTGCACCCAGTGGCCAACCCTTCTAGAAGCTTTGGCCACACGAACCGACGAAACGCCGCATCTCAGGTTAACCACTATCGTCACCGGAAGATCCAGTAACTCCGTTCAGCGCGTCATGAAGGAAATCGGAACCCGAATGGACAAGTTCGCAAGACTCATGGGCGTTCCGTTTAAGTTTAACGTCCTTCATCATTCCGGCGATCTCTCCGATTTCAATTTCTCCCAACTCGACATCAAAGACGATGAAGCTTTGGCTATTAACTGCGTCAACGCGCTGCATTCGGTTTCCGCGCTCGGGAACAACCGCGACGCCTTGATATCCTCGCTGCAAGCGTTGCATCCGCGGATTGTGACGGTCGTCGAGGAGGAGGCTGATTTGGACGTCGGAATCGAGGGTTACGAGTTCGTGAAAGGGTTTGAGGAATGTTTGAGGTGGTTTAGGGTTTACTTCGAGGCTCTCGACGAGAGTTTCGTGAAGACGAGCAACGAGAGGCTGATGCTGGAGCGCGCCGCGGGGAGGGCCGTGGTGGACCTGGTGGCGTGCTCGCCGGCGGAATCCGTGGAGCGGAGGGAGACGGCGGCGAGGTGGGCGGCGCGCCTGCATGGGGGAGGGCTAAACGTGGTGCCGTTTAGCGAGGAAGTATGCGATGACGTGAGGGCGCTGTTGAGGAGATACAGGGAGGGCTGGTCCATGGCGGCGTGCTCCGACGCCGGAATATTCTTGTCATGGAAGGAAACACCGGTGGTGTGGGCCAGTGCATGGAGGCCTTAA 1449 0.55 MDTLFRLVSFQQQQPDPSLNSTTSRTSSSSRSSRQNYYHYSHQEEEECFNFYMDEEDLSSSSSKHYYPYQQPNVSTNTFSTTEYSYSFSPTPPVPDFNFEFSPNWSHNLLLQSAQSLADNNSTRLHHLLWMLNELSTPYGDTDQKLAAYFLQALFSRVTDAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNPKLHILDISNTYCTQWPTLLEALATRTDETPHLRLTTIVTGRSSNSVQRVMKEIGTRMDKFARLMGVPFKFNVLHHSGDLSDFNFSQLDIKDDEALAINCVNALHSVSALGNNRDALISSLQALHPRIVTVVEEEADLDVGIEGYEFVKGFEECLRWFRVYFEALDESFVKTSNERLMLERAAGRAVVDLVACSPAESVERRETAARWAARLHGGGLNVVPFSEEVCDDVRALLRRYREGWSMAACSDAGIFLSWKETPVVWASAWRP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00912 482 Pfam GRAS domain family 108 481 IPR005202 -
Pste7g00912 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 80 471 IPR005202 -
Pste7g00912 482 MobiDBLite consensus disorder prediction 11 37 - -
Pste7g00912 482 ProSiteProfiles GRAS family profile. 97 481 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00912 Pste-Chr7 8442509 8443957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00912 1 482 GRAS Transcription Factor Family AT4G37650 57.786 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste7g00912 GRAS 1.1e-101 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00912 7 8442509 8443957 Pste7g00912 7 8442509 8443957 ECH
Pste1g02019 1 6318365 6319783 Pste7g00912 7 8442509 8443957 PCT