LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g00903	GCAAAACAGCAAGATTGGCTTTTGGCGGCTTCTTGAGTGGCGTGGCAACAGAACACAACCTTCCCATGGCGGCTTTGTCATCCAGCTCTTGCACATTCCTTCCCAAATTCTCCTCACACAGATCCAAATTCCATTCCCACCAGCTCAATTTAGCCCCTTGGCCCCCAAAATTAAAGCCAAACAATCCCTTATCTTTGAGGGGCAAAAGCTCCAACGTGTTCAGCGAAGAATTCCATGGAAGCGTGGCGGAAGAGGAGGGTTCCAGCTCCATGGATGATAAGCAATTCGTGCGTTGGTTTCGTGAGACGTGGCCTTACTTGTGGGCCCACCGTGGTGCCACCTTCGTTGTCATCATTTCCGGTGAAATTGATATAGCCTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCCGGGACCTATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGACAGCCTAAGTATGTTGGTCCATACAGGATAACTGATGATGAGTCTCTTGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGAATGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTACAATATTCGTCGACATGGTGACAACAGCCGGTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGGAACTTTCTTGCTGCCAAGAGAAGAGGGGTTGTCAAAGGAGTTGATTATGGGTCAACTGGGGAGGTCAAAAAAGTAGATATTTCTCGCATGCGAGAGAGGCTTGATGGCAATTGTATTGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGACAAGTATTAAATTGCAATACCTATGAAGTTGCGACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTTATTTGTATTATGGATGGTCCAATACTGGATGAAAATGGACACCTTATTGGTTTCTTGACTCTTCAAGAGGCAGACATGGTAATTCGTAAACGGGTTGAGCAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGCCGAAGAAAGTTTAAATTCTCTGAACAATTTTAATGGGGCAGTCCATTTTCCACAGAATGGAACACCATTTTCAGAATGTCATAATGCAACTTTTCATAATGGTGTTGGTTTTGACAATGGGAATGGCCTATGGTCTGGGGAGCAAGGTTTTGCTATTGGAGGTCAGGAGTGGCTAAGTCGAATGAATGGTTACCTGTCAGAACTGGCAGCTGCAGCCTTTGTTTGCAGAGGTGGTATTCAAAGAGTTCATTTGTTGGATGGCACTATCAGTGGTGTTCTGTTGTTGGAATTGTTCAAGAGAGATGGGATGGGAACGATGGTGGCTAGTGACCTTTATGAAGGGACCCGGATGGCTCAAGTAGAAGATATTTCTGGAATAAAACAACTTATCCAGCCTTTAGTGGAGTCTGGCATATTAGTTAAACGGACTGATGAAGAGCTGCTTCAATCATTAGGCTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATCATTGCTTGCGCTGCACTCTTTCCCTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTACAATTGCAGTATCCCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTTGATTATATAGAGAAGAAAGCAACATCTCTTGGATTTGAAATGCTTTTCTTGCTTACCACTCGTACTGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTCTATACCGGAGAAGAAAAGAAAAACAATTAATCTATCCCGCAAGTCTAAGTATTACATGAAGAACCTTCTACCTAATAAGAGAGGAATTACTGTTGGTAGCAAATTTACTTCCAGTTAGCGCATCTTTTTCCCACCGGGAAAAGGTGTTTGGCACATTCTTAGAGTGTAGGTAATAATCTCGTAATTATATGGTTGCTGGAAAATCAAGAGCTATGGCAAGTTTTCAATGGCCCAGTTTTCTGTAATTTATTATTATCTAATTTCCAGATTTTGAGTTTTTTCTCTCACCCCCAATGTTTATCAATTTGCTAGTTTTTACATATACATGGACTGATAGTTTGTTGTTTTGTATCTTCAGTGAATTAAGATAAAGAAATTAACAAGAGTGAATAATGAATATAATGAATTGCATAAAGCACGATTCCCAA	2145	0.4238	MAALSSSSCTFLPKFSSHRSKFHSHQLNLAPWPPKLKPNNPLSLRGKSSNVFSEEFHGSVAEEEGSSSMDDKQFVRWFRETWPYLWAHRGATFVVIISGEIDIAFLHHLGIRFVLVPGTYVQIDNLLRERGRQPKYVGPYRITDDESLAAAMEAAGRIRMMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGVDYGSTGEVKKVDISRMRERLDGNCIVILSNLGYSSSGQVLNCNTYEVATACALAIGADKLICIMDGPILDENGHLIGFLTLQEADMVIRKRVEQSETAANYVKAVAEESLNSLNNFNGAVHFPQNGTPFSECHNATFHNGVGFDNGNGLWSGEQGFAIGGQEWLSRMNGYLSELAAAAFVCRGGIQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVEDISGIKQLIQPLVESGILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVATIAVSPDCRGQGQGDKLLDYIEKKATSLGFEMLFLLTTRTADWFVRRGFSECSIDSIPEKKRKTINLSRKSKYYMKNLLPNKRGITVGSKFTSS	589

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g00903	589	SUPERFAMILY	Carbamate kinase-like	70	298	IPR036393	-
	Pste7g00903	589	Pfam	Amino acid kinase family	103	294	IPR001048	-
	Pste7g00903	589	Hamap	Amino-acid acetyltransferase [argA].	67	573	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Pste7g00903	589	CDD	NAT_SF	468	530	-	-
	Pste7g00903	589	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	427	575	IPR000182	GO:0016747
	Pste7g00903	589	NCBIfam	amino-acid N-acetyltransferase	382	573	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Pste7g00903	589	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	430	577	IPR016181	-
	Pste7g00903	589	PANTHER	AMINO-ACID ACETYLTRANSFERASE	56	581	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Pste7g00903	589	Gene3D	-	72	426	IPR036393	-
	Pste7g00903	589	Gene3D	-	427	573	-	-
	Pste7g00903	589	CDD	AAK_NAGS-ABP	73	421	IPR033719	-
	Pste7g00903	589	Pfam	Acetyltransferase (GNAT) family	466	532	IPR000182	GO:0016747
	Pste7g00903	589	SUPERFAMILY	Carbamate kinase-like	375	423	IPR036393	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g00903	Pste-Chr7	8350139	8360659	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Pste7g00903		AA_kinase	9.8e-09	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste1g01994	1	6240968	6250777	Pste7g00903	7	8350139	8360659	PCT