Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00897 ATTTCAAAATCTAGTCCTTCCAACTTGTCAATTGTGTCATATACTGAAGCAAGTGATATCTCAAGCTTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCCCCAAATCTCAAGGCCTTTACCTTCAATGAACTAAAGAATGCCACCAGAAACTTTCGCCCTGACAGTCTTCTTGGTGAAGGAGGATTTGGCTATGTTTACAAGGGGTGGATTGATGAACACACATTTACAGCTTCGAAACCTGGATCAGGGATGGTAGTTGCTGTTAAGAAACTCAAGCCTGAAGGGTTACAGGGTCATAAGGAGTGGTTGACTGAAGTGAACTACCTTGGGCAACTTCACCATCAGAATCTGGTTAAATTGATTGGACACTGCGTGGAAGGAGAGCACCGGCTGTTGGTCTATGAGTTTATGTCCAAAGGGAGTTTAGAGAATCATCTGTTTAGAAGAGGACCACAGCCTCTATCTTGGTCAGTGAGGATGAAAGTGGCCATTGGTGCTGCCAGAGGACTCGCTTTTCTTCATAATGACAAATCTCAAGTCATATACCGTGATTTCAAAGCATCTAATATCCTACTAGACGCTGATTTCAATGCCAAACTCTCTGATTTTGGCTTAGCAAAGGCAGGCCCTACCGGTGATAGAACTCATGTGTCTACTCAAGTCATGGGAACTCAAGGCTATGCAGCACCAGAATATGTTGCAACAGGTCGGCTGACAGCTAAAAGTGATGTATACAGCTTTGGAGTTGTGTTGCTTGAACTATTGTCTGGTCGGCGCGCTGTTGACAGAACAAAAGCTGGTGTAGAGCAGAATCTAGTAGAGTGGACAAAACCATATTTGGGTGACAAAAGAAAACTATTTCGGATTATGGACACAAGGTTGGGAGGCCAATACCCACAAAAAGGAGCCTACATGGCTGCTACTCTTGCTCTAAGATGCCTTGATCGCGAAGCCAAATCAAGACCTCCAATGACAGAGGTTTTAGAAACTCTTGAACAGATTGCAGAATCAAAAACTGCAGGGAGGAATTCTGGATCATTAGAACAAAAGGGAGTCCATGCTCCTGTCAGAAAATCCACAGAGAAAAAGGGTCCTCTT 1104 0.4402 ISKSSPSNLSIVSYTEASDISSFPTPRSEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMVVAVKKLKPEGLQGHKEWLTEVNYLGQLHHQNLVKLIGHCVEGEHRLLVYEFMSKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLAFLHNDKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGVEQNLVEWTKPYLGDKRKLFRIMDTRLGGQYPQKGAYMAATLALRCLDREAKSRPPMTEVLETLEQIAESKTAGRNSGSLEQKGVHAPVRKSTEKKGPL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00897 368 MobiDBLite consensus disorder prediction 334 368 - -
Pste7g00897 368 Pfam Protein tyrosine and serine/threonine kinase 57 333 IPR001245 GO:0004672|GO:0006468
Pste7g00897 368 ProSitePatterns Protein kinases ATP-binding region signature. 59 92 IPR017441 GO:0005524
Pste7g00897 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Pste7g00897 368 SUPERFAMILY Protein kinase-like (PK-like) 31 334 IPR011009 -
Pste7g00897 368 FunFam Probable serine/threonine-protein kinase PBL8 139 352 - -
Pste7g00897 368 PANTHER OS01G0588500 PROTEIN-RELATED 27 337 - -
Pste7g00897 368 CDD STKc_IRAK 59 336 - -
Pste7g00897 368 ProSiteProfiles Protein kinase domain profile. 53 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00897 368 FunFam Serine/threonine-protein kinase BIK1 20 138 - -
Pste7g00897 368 Gene3D Phosphorylase Kinase; domain 1 29 138 - -
Pste7g00897 368 Gene3D Transferase(Phosphotransferase) domain 1 139 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00897 Pste-Chr7 8310828 8312744 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00897 31 333 Glycoside Hydrolase AT3G07070 53.094 1.35e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste7g00897 PK_Tyr_Ser-Thr 4.7e-47 CL0016