Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00890 ATGTCCATCGACTCCTCCAACGACCCAACTCCTGACTTATACTGTAGCGAAGTAGCTAGCGATGTCATTCACTTCGATTCTAATGAGGCTTTGAAGTTGAATGTTCTATGGGGAGACTCTGATAGTGATGATGAAAGCTGTCTATTGAGTTTATTAGAATCTGAACATGACCAAGTACATGAACAAACAAAGTTTCTAGGACAACTTCGCAAAAAAACATGGCTGATTAATGCTCGAGAAGAGGCCATAAACTGGATCCTAAAGGTGCATGCTTACTACAGATTTAACCCCGAGACAGCATATCTTTCTGTAAATTATCTCGACCGTTTTCTCGTGTCACACACCTTGACGCAAGACAAATCATGGCCTCTGGCACTGTTATCAGTGGCTTGTCTAGCACTAGCAGCGAAAATGGAAGAAACTAAAGTGCCACTTCTTTTGGACCTGCAATTGATCGAATCCAAGTTTTTGTTTAAGCCCAAAACAGTTCAGAGGATGGAGCTTTTGGTTATGGCCAGTCTCAAGTGGCGATTGCGCTCTATAACCCCTTTTGATTTTGCACACCTTTTCATTGCCAATCTTTCATGCTCTGCTTCCACATGGGGAGATTTAAGTTACATTGTTTCTCGTGTCTCAGATGTTATTATCAGAACATGTCTAGTCCTGGATTTCTTGGAGTTTTCACCATCCACAATAGCAGCAGCAGCACTGTTATGGGTAACCAATCAATGTTTACATGACAAGAAATCATCAGATTGCTTCCACAAGAATATAAGCATTGAGATGGTGGAGAAATGTTACAAACTAATGAAGCAGAAACAGATCATTGGGCGATCAGAACTTTGTTGGGCAGAGAGTGTACAATTATTGCCCCGAAGTCCCACCTGTGTTCTTGATCATGCAGCTATGCAAGAAAGCAGCGATGCTCACAAGCTCTGACTTGAAACACTGCCACGTGTATCTCAAAGAGGCTAAAACATCGCTTTCAAACTGTCCATTATCGATTCCTTTTTTATTTCTTTGAATTGGTGTGAGTGTGATTGTGTGTGCGTCTTCCTTAAGGTTCGTCATGGAACATTTGATTGGGTGTGTATTTTCAACTAGTTTCATCATGGAGATTTCTGACTGTAAACAAAAGTAGTTATATATCGGAAAATTCTACTACTTTATTGATATTCCT 1180 0.4059 MSIDSSNDPTPDLYCSEVASDVIHFDSNEALKLNVLWGDSDSDDESCLLSLLESEHDQVHEQTKFLGQLRKKTWLINAREEAINWILKVHAYYRFNPETAYLSVNYLDRFLVSHTLTQDKSWPLALLSVACLALAAKMEETKVPLLLDLQLIESKFLFKPKTVQRMELLVMASLKWRLRSITPFDFAHLFIANLSCSASTWGDLSYIVSRVSDVIIRTCLVLDFLEFSPSTIAAAALLWVTNQCLHDKKSSDCFHKNISIEMVEKCYKLMKQKQIIGRSELCWAESVQLLPRSPTCVLDHAAMQESSDAHKL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00890 312 SUPERFAMILY Cyclin-like 43 178 IPR036915 -
Pste7g00890 312 CDD CYCLIN_AtCycD-like_rpt2 181 270 - -
Pste7g00890 312 FunFam D6-type cyclin 176 268 - -
Pste7g00890 312 FunFam D6-type cyclin 62 175 - -
Pste7g00890 312 CDD CYCLIN_AtCycD-like_rpt1 78 176 - -
Pste7g00890 312 Gene3D - 50 267 - -
Pste7g00890 312 PANTHER CYCLINS 50 272 IPR039361 -
Pste7g00890 312 SUPERFAMILY Cyclin-like 163 275 IPR036915 -
Pste7g00890 312 Pfam Cyclin, C-terminal domain 181 273 IPR004367 -
Pste7g00890 312 SMART cyclin_7 84 172 IPR013763 -
Pste7g00890 312 SMART Cyclin_C_2 181 307 IPR004367 -
Pste7g00890 312 Pfam Cyclin, N-terminal domain 51 178 IPR006671 -
Pste7g00890 312 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Pste7g00890 312 Gene3D - 61 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00890 Pste-Chr7 8207656 8209243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00890 1 275 Core Cell Cycle Gene Families AT1G70210 39.161 6.60e-60 193