Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00889 TTGAAACATGAAACCTCGAGGGAGATAATTTTCTGTTCACAGCTGCTACTGTTTAAATTGGAGTTGAGTTCTGTGATTCGTCAACTATTGGTATTTGCCAAGATGGGAAGACAAAGTCCTGGAAAATGGATCAGAAACTTGTTTATGGGGAAGAAATCTTCATCAAAGTCCAAATCCTCTAGAGAGAAAGATATTTATAAACCTGCAAGTACCAAGGATGTTCTGGTGGTGTCTTCTGAGGCATCGATGTCTACTACAACATCTGGAGCTAATGCTACCAAAAGAGTGGTATCAGAAAAGGAAGTTGTTGGTAAATCATCAAATGATGGGGTAATTCTTTCAAGAGGAGAAGAACAGGCCAATGCACAATCACTTGTTAATTTTGGTTCTGGGGACCATCATGATGAAAACAAGCTAATAGAAGCAGCTATAATAGTTCAGGCTGCTATCAGAGGCTATCAGGCACGCGGGACATTTAAAACTCTCAAAGCTATCATACCACTGCAAGCTTTTATTCGTGGCCAGTTGGTTCGACGACAAGCTATTTCTGCTTTATATTGTGTGAAGTCAATAGTTAAATTTCAAGCATTGGCTCGTGGTTACAAAGTTAGGCACTCTAATATTGGGCTTGCAGTTCAGAAAATTTTTAAGGATACTAAATTTCCTAATTCTATTGGAGTAGTTACATCCACACAGGCAGAGAAGCTCTCAGATAATATCTTTGTTCAAAAGCTTCTGGCTTCATCACCCTCAGTGGTTCCTCCAAATTTCAAACATAATGCTGATGAACCTAACTTAGTTTGGAAGTGGCTTGACCTTTGGACGAAATCAAACTTTTGGGTACCTGTTAGAGAAGCGCAGAAATCTGATTCGGTATCTGATAAGAAAAATGGAAGTTGTCAAAAAGTTGAAACTAATAAGGGACAAGTTAAAAGAAATACCAAGAAAGCACCTACTGTGAAGATTGGTGATGATGTACTTTCAGATTCTAACAAACATAAACGGTATCCAAAAAAGGATTCAAACCTCCCATTGCATTCAGGTTTATCTAAAAAGACTCATATTCAGAATGGTTCTGATAAATCTGAGGTTGCTAATGAGAAAACAAAAGACATCACAAGAAAATTTTCAGATCATTCAACAGTCAATGATATTCCTGTGAAAGATGCCAGTGCTTCTTCAGAGAAGAAAGACTTGACAGTGTCAAAATCAAAACAGGATGATCTTGAGAAAAGTCTTGGACAGCAAGCAGAAGAGCATGATAATAATGAGTCATGTAATGGTACTAATACCCACTTGCACCCTATGATGAATGGTAAAGATGGAGATCTCATTGAGGACTTGAGTAATGTAAATTCTAAGAATTTCAATAGAAGAGCTTCCCTGCCTGCTAATTTTACAGATCATGAAATACATAATAACAGTCCAAGACGTCCCAGTTATATGGCTCCCACTGAATCTACAAAAGCTAAGCTAAGAGGACATGGACAAGGCTCTCCAAGGTCTGTTAGTGATATGGCAGACGTAAGTAGTATAACCCGCAGGCTTTCGCTTTCATCTTCGCTTAATGGCAAGTTAGGTTCATTCTCTCCTCGGTCAGATAGATTGTCTGTCTTGAGCAACAAGATAAGGACTGACAGATCTCTATCATCTTCAAGGGATGGAACTGATGAAATCATGAAATTGAAAAGTGATTTTGGTGATGAAGATGAAATCATGAAATTGAAAAGTGATTTTGGTGATGAAGATGAACAACAAAAGGATTGTCGG 1770 0.3814 LKHETSREIIFCSQLLLFKLELSSVIRQLLVFAKMGRQSPGKWIRNLFMGKKSSSKSKSSREKDIYKPASTKDVLVVSSEASMSTTTSGANATKRVVSEKEVVGKSSNDGVILSRGEEQANAQSLVNFGSGDHHDENKLIEAAIIVQAAIRGYQARGTFKTLKAIIPLQAFIRGQLVRRQAISALYCVKSIVKFQALARGYKVRHSNIGLAVQKIFKDTKFPNSIGVVTSTQAEKLSDNIFVQKLLASSPSVVPPNFKHNADEPNLVWKWLDLWTKSNFWVPVREAQKSDSVSDKKNGSCQKVETNKGQVKRNTKKAPTVKIGDDVLSDSNKHKRYPKKDSNLPLHSGLSKKTHIQNGSDKSEVANEKTKDITRKFSDHSTVNDIPVKDASASSEKKDLTVSKSKQDDLEKSLGQQAEEHDNNESCNGTNTHLHPMMNGKDGDLIEDLSNVNSKNFNRRASLPANFTDHEIHNNSPRRPSYMAPTESTKAKLRGHGQGSPRSVSDMADVSSITRRLSLSSSLNGKLGSFSPRSDRLSVLSNKIRTDRSLSSSRDGTDEIMKLKSDFGDEDEIMKLKSDFGDEDEQQKDCR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00889 590 Gene3D - 136 185 - -
Pste7g00889 590 Pfam Protein of unknown function (DUF4005) 471 542 IPR025064 -
Pste7g00889 590 MobiDBLite consensus disorder prediction 467 508 - -
Pste7g00889 590 MobiDBLite consensus disorder prediction 390 418 - -
Pste7g00889 590 Pfam IQ calmodulin-binding motif 189 204 IPR000048 GO:0005515
Pste7g00889 590 Pfam IQ calmodulin-binding motif 163 180 IPR000048 GO:0005515
Pste7g00889 590 Pfam IQ calmodulin-binding motif 141 156 IPR000048 GO:0005515
Pste7g00889 590 PANTHER IQ-DOMAIN 5-RELATED 35 520 - -
Pste7g00889 590 MobiDBLite consensus disorder prediction 326 341 - -
Pste7g00889 590 SMART iq_5 138 160 IPR000048 GO:0005515
Pste7g00889 590 SMART iq_5 161 182 IPR000048 GO:0005515
Pste7g00889 590 SMART iq_5 186 208 IPR000048 GO:0005515
Pste7g00889 590 MobiDBLite consensus disorder prediction 356 382 - -
Pste7g00889 590 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Pste7g00889 590 MobiDBLite consensus disorder prediction 419 434 - -
Pste7g00889 590 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Pste7g00889 590 MobiDBLite consensus disorder prediction 286 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00889 Pste-Chr7 8200191 8207544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00889 35 556 IQD Protein Family AT1G14380 31.429 1.21e-55 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00889 7 8200191 8207544 Pste7g00889 7 8200191 8207544 ECH
Pste7g00889 7 8200191 8207544 Pste6g02526 6 12507449 12517024 ECH