LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g00889	TTGAAACATGAAACCTCGAGGGAGATAATTTTCTGTTCACAGCTGCTACTGTTTAAATTGGAGTTGAGTTCTGTGATTCGTCAACTATTGGTATTTGCCAAGATGGGAAGACAAAGTCCTGGAAAATGGATCAGAAACTTGTTTATGGGGAAGAAATCTTCATCAAAGTCCAAATCCTCTAGAGAGAAAGATATTTATAAACCTGCAAGTACCAAGGATGTTCTGGTGGTGTCTTCTGAGGCATCGATGTCTACTACAACATCTGGAGCTAATGCTACCAAAAGAGTGGTATCAGAAAAGGAAGTTGTTGGTAAATCATCAAATGATGGGGTAATTCTTTCAAGAGGAGAAGAACAGGCCAATGCACAATCACTTGTTAATTTTGGTTCTGGGGACCATCATGATGAAAACAAGCTAATAGAAGCAGCTATAATAGTTCAGGCTGCTATCAGAGGCTATCAGGCACGCGGGACATTTAAAACTCTCAAAGCTATCATACCACTGCAAGCTTTTATTCGTGGCCAGTTGGTTCGACGACAAGCTATTTCTGCTTTATATTGTGTGAAGTCAATAGTTAAATTTCAAGCATTGGCTCGTGGTTACAAAGTTAGGCACTCTAATATTGGGCTTGCAGTTCAGAAAATTTTTAAGGATACTAAATTTCCTAATTCTATTGGAGTAGTTACATCCACACAGGCAGAGAAGCTCTCAGATAATATCTTTGTTCAAAAGCTTCTGGCTTCATCACCCTCAGTGGTTCCTCCAAATTTCAAACATAATGCTGATGAACCTAACTTAGTTTGGAAGTGGCTTGACCTTTGGACGAAATCAAACTTTTGGGTACCTGTTAGAGAAGCGCAGAAATCTGATTCGGTATCTGATAAGAAAAATGGAAGTTGTCAAAAAGTTGAAACTAATAAGGGACAAGTTAAAAGAAATACCAAGAAAGCACCTACTGTGAAGATTGGTGATGATGTACTTTCAGATTCTAACAAACATAAACGGTATCCAAAAAAGGATTCAAACCTCCCATTGCATTCAGGTTTATCTAAAAAGACTCATATTCAGAATGGTTCTGATAAATCTGAGGTTGCTAATGAGAAAACAAAAGACATCACAAGAAAATTTTCAGATCATTCAACAGTCAATGATATTCCTGTGAAAGATGCCAGTGCTTCTTCAGAGAAGAAAGACTTGACAGTGTCAAAATCAAAACAGGATGATCTTGAGAAAAGTCTTGGACAGCAAGCAGAAGAGCATGATAATAATGAGTCATGTAATGGTACTAATACCCACTTGCACCCTATGATGAATGGTAAAGATGGAGATCTCATTGAGGACTTGAGTAATGTAAATTCTAAGAATTTCAATAGAAGAGCTTCCCTGCCTGCTAATTTTACAGATCATGAAATACATAATAACAGTCCAAGACGTCCCAGTTATATGGCTCCCACTGAATCTACAAAAGCTAAGCTAAGAGGACATGGACAAGGCTCTCCAAGGTCTGTTAGTGATATGGCAGACGTAAGTAGTATAACCCGCAGGCTTTCGCTTTCATCTTCGCTTAATGGCAAGTTAGGTTCATTCTCTCCTCGGTCAGATAGATTGTCTGTCTTGAGCAACAAGATAAGGACTGACAGATCTCTATCATCTTCAAGGGATGGAACTGATGAAATCATGAAATTGAAAAGTGATTTTGGTGATGAAGATGAAATCATGAAATTGAAAAGTGATTTTGGTGATGAAGATGAACAACAAAAGGATTGTCGG	1770	0.3814	LKHETSREIIFCSQLLLFKLELSSVIRQLLVFAKMGRQSPGKWIRNLFMGKKSSSKSKSSREKDIYKPASTKDVLVVSSEASMSTTTSGANATKRVVSEKEVVGKSSNDGVILSRGEEQANAQSLVNFGSGDHHDENKLIEAAIIVQAAIRGYQARGTFKTLKAIIPLQAFIRGQLVRRQAISALYCVKSIVKFQALARGYKVRHSNIGLAVQKIFKDTKFPNSIGVVTSTQAEKLSDNIFVQKLLASSPSVVPPNFKHNADEPNLVWKWLDLWTKSNFWVPVREAQKSDSVSDKKNGSCQKVETNKGQVKRNTKKAPTVKIGDDVLSDSNKHKRYPKKDSNLPLHSGLSKKTHIQNGSDKSEVANEKTKDITRKFSDHSTVNDIPVKDASASSEKKDLTVSKSKQDDLEKSLGQQAEEHDNNESCNGTNTHLHPMMNGKDGDLIEDLSNVNSKNFNRRASLPANFTDHEIHNNSPRRPSYMAPTESTKAKLRGHGQGSPRSVSDMADVSSITRRLSLSSSLNGKLGSFSPRSDRLSVLSNKIRTDRSLSSSRDGTDEIMKLKSDFGDEDEIMKLKSDFGDEDEQQKDCR	590

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g00889	590	Gene3D	-	136	185	-	-
	Pste7g00889	590	Pfam	Protein of unknown function (DUF4005)	471	542	IPR025064	-
	Pste7g00889	590	MobiDBLite	consensus disorder prediction	467	508	-	-
	Pste7g00889	590	MobiDBLite	consensus disorder prediction	390	418	-	-
	Pste7g00889	590	Pfam	IQ calmodulin-binding motif	189	204	IPR000048	GO:0005515
	Pste7g00889	590	Pfam	IQ calmodulin-binding motif	163	180	IPR000048	GO:0005515
	Pste7g00889	590	Pfam	IQ calmodulin-binding motif	141	156	IPR000048	GO:0005515
	Pste7g00889	590	PANTHER	IQ-DOMAIN 5-RELATED	35	520	-	-
	Pste7g00889	590	MobiDBLite	consensus disorder prediction	326	341	-	-
	Pste7g00889	590	SMART	iq_5	138	160	IPR000048	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g00889	Pste-Chr7	8200191	8207544	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g00889	35	556	IQD Protein Family	AT1G14380	31.429	1.21e-55	196

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste7g00889	7	8200191	8207544	Pste7g00889	7	8200191	8207544	ECH
	Pste7g00889	7	8200191	8207544	Pste6g02526	6	12507449	12517024	ECH

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