Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00876 ATGTCGAACTTGCACTTACAGCTTCACTCACCACCTTCACTCTTATCGTCTTCTTCTTCATCATTTTCTTCTTCTCTCAAGCTTTTCCCAAAGCCACTTCCTTTCAACACTCCTAAACCTTTCTCCCTCAGATGCCGCCACTCTGACCTCTTCGACCAGAACACCTTAGCCTCCACACCTCGACCTGTGAGACCCACTGCTTCAGTTGGAGCTTTGCCGCCTAGGGTTTATGTTGGTTACTCAATTTACAAAGGGAAGGCTGCTCTTACATTGACTCCTAGACCCCCCGAATTTGTGCCGCTTGAGTCAGGGGCATACAAAATATCTAAGGAAGGTTATGTGTTACTTCAGTTTGCACCTGCAGTTGGTACACGGCAATATGATTGGAATAGAAAGCAGGTGTTTTCCTTATCGGTGGGTGAAATGGGAAGTTTGATTAGCCTTGGTGCAAGGGAGTCTTGTGAATTTTTTCACGATCCTTTTAAGGGCAAAAGTGATGAAGGTAAAGTCAGAAAAATTTTGAAGTTGGAGCCTTTGCCAGATGGTTCTGGACACTTCTTTAACCTAAGTGTTCAAAACAGGCTTGTGAACGTGGATGAAAGCATCTTTATGCCTGTTACAAAAGCAGAGTTTGCAGTTTTGAACTCAACTTTCAATTTTATCATGCCATACCTTCTTGGTTGGCATACCTTTGCAAACTCCATAAAGCCAGAAGATAATGGTGAAATGAATAGTGCCAACCCAAGATATGGAGGAGACTATGAATGGAACAGATAG 777 0.4324 MSNLHLQLHSPPSLLSSSSSSFSSSLKLFPKPLPFNTPKPFSLRCRHSDLFDQNTLASTPRPVRPTASVGALPPRVYVGYSIYKGKAALTLTPRPPEFVPLESGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSLISLGARESCEFFHDPFKGKSDEGKVRKILKLEPLPDGSGHFFNLSVQNRLVNVDESIFMPVTKAEFAVLNSTFNFIMPYLLGWHTFANSIKPEDNGEMNSANPRYGGDYEWNR 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00876 258 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 52 258 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pste7g00876 258 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 67 242 - -
Pste7g00876 258 Gene3D Transcriptional Coactivator Pc4; Chain A 70 246 IPR009044 GO:0003677|GO:0006355
Pste7g00876 258 MobiDBLite consensus disorder prediction 237 258 - -
Pste7g00876 258 Pfam Whirly transcription factor 82 216 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pste7g00876 258 SUPERFAMILY ssDNA-binding transcriptional regulator domain 74 258 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00876 Pste-Chr7 8113130 8116179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00876 6 258 Whirly Transcription Factor Family AT1G14410 62.308 9.83e-117 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Pste7g00876 Whirly 4.4e-60 CL0609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00876 7 8113130 8116179 Pste7g00876 7 8113130 8116179 ECH