Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00869 TCCACATGGCAAATTGCCACAGTGTTATCCTTTTGCTTTCTTTGGTAATATTGATTCCTTCTCTAAATGCCAATATCTTAGAGCATGATGAGTATTGGAAGAGCCATGCCAAAGAGTTCGATGCATATTGGCAGGAAAAGGCAGAAGTCGCAAAAGCACATAGTGAGGCAGCATATTTTACTGATCCATATGCTGTCTCTGGCAACTTTACTTCCACAATTAGCGAACTCATAATTGGGGGAAAAACTACACGAAGGAACTTAAAAGGAAGAAGAGACAAAGGTCCATGCATGGCCACTAACCCCATTGATAGGTGTTGGAGGTGTGACCCTAACTGGGCCAACAACCGCCAGAAGCTGGCAGATTGTGTCCAGGGCTTTGGCAGGAACACCGTTGGAGGAAAAGGTGGTCCATATTATGTGGTCACAGATCCCTCTGATGGTGATCTTGTAAACCCTAAGCCCGGCACTCTTCGTCATGCTGTCACACGTAATGGTCCATTGTGGATCATCTTCGCTCGTAGCATGATCATCACTCTCCAACAAGAGCTCATCATGAACAGCAACAAAACCATTGATGGAAGAGGTGTTGAGGTTTACATCACTGGTGGTGCTGGCATAACGGTGCAATATGTCCAGAACATCATCATCCATGGACTTAAGATCTACGACATTCTGCCTGGTGAAGGTGGAATGATTAGAGACTCTGAGGGACATTATGGTTTTAGGACTAGGAGTGATGGTGATGGCATTTCCGTCTTTGGTGCTAGCAATCTTTGGATTGATCATGTTTCCATGAGAAACTGCTCAGATGGACTCATTGATGTCATCATGGGTTCCACTGCTGTTACTATTTCCAACAGCCATTTCACTGATCACAATGAGGTGATGTTGTTTGGTGCCTGGGACAGTTACTATCAAGATAAAATCATGCAAATCACTCTAGCGTTCAACCACTTTGGAAAGAGATGTATTCAAAGGATGCCCAGAGTAAGATATGGTTTTGTCCATTCTGTTAACAATGACTACACTCATTGGGAAATGTATGCTATTGGTGGTAGCCAGAACCCCACTATTATTAGTGAGGGTAATCGATTCACTGGCCCTAACCTCCGATTCTCTAAAGAGATCACAAAGAGAGAATACACGGAAGAGAGTGTGTGGAAAAGTTGGCAGTGGAGATCAATCAATGATGAGTACTTGAATGGTGCGTTTTTTGTGGAATCTGGCCCTCAACTTGCTAACAGGCCTTTCTCAAGGCAAGACATGATCTCAGCAAAGCCAGCGAGTTATGTGGGAAGGCTTACACGTTATTCTGGAAGCCTTAGGTGTAGATTAAACATTTGTGCAAAAGTTTGGATCTCCGAGTCTCTGACTTCAAGGTCTTATAACTTGGATAGCGTTGTTGACTTTGGTTGTTGGGGTGAAACTTCGAGAAGCCTTGCAATTTCATTATTGCGTGGAGCAGCTGTATCTTCTGATGGGGAATCATTGAAGGATTGGTCAATTGGACCTCTGGATACTCCAAGAACATTTGCCATAGGCCCTAAAAAAGATGGATCAATTTTCATTTTTCATTCTCCAAACACCTCTGTCAATCCTGTGGCCTGTTTCACCACATGTCCATATAAAGTGCTACCATCCATTATAGAACTTATAAGTGTAATTGCATTGTTAGCCACGAGTAAAAGTCACTCTGAAACCGTTCATAACCCGTTTTTCAGCCTCATGTCCCCAATGTCTATACCCAAAATTTGGCTTTTGATATGCATTTCCTTTCACTATATAAATGGACCAGTCGTGCTACTACGCCCCCTAGTTACACCTTCACAAGAGTCACGTACTTCAACTCTTACACCAATGATATCAGTCAAAATCCTTTTACAACGAGAAATCATGGACATATCCCTTCTGGCCCAACGGAAACCATTAGCCCTTGATAGAAAGTTGGTTAAGAAGTTTAAAGCTCAGTATGTGATTATCTGCCTCTATCACATCACCTCTATCGCCCTTGCCAGCGTTCGGCAAGGAAAGAATGAGTCCTTACGTGATTTCAAGAAACATGATCACAGCAAAGCCTTAGGTGCAGAGTGGGTCAACCTTTTTAATTACCATTATTGCCACTTAATTAAACTCTTCGTCACAAAAATGCCCATGATGGCATGGATGGGGTACAAACAACTTACCAAAGCAAGCAAGAAGTGGGGTTCTCCATATTCTCTCTATTCAGTAGTTAACAACAAGGGTCCCTCCATTTTGGTTTATCTCTTTGTTGCGGCCGCGAAAGAAGAGTATTGGCATAGCCATGTCGATGAATATGATTCATATTGGCAGGAAAAGGCAAAAGTTGCAAAAGCACATAGTGAGGCTGCATATTTTGCTGATCCATATGCTGTCTCTGGCAACTTTACTTCCTCTATTAGCGAACTAATAATTGGAGGAAAGAGCACACGAAGGAATTTGAAAGGAAGACATAGAGGAGGTCCATGCATAGCCACGAACCCCATTGACAGGTGTTGGAGGTGTGACCCTAACTGGGCCAACTACCGCCAGAAGCTAGCAGACTGTGTCCAGGGCTTTGGCAGGAACGCTGTTGGAGGAAAAGGTGGTCCATATTATGTGGTCACAGATCCCTCTGATGATGAACTTATAAACCCTAAGCCCGGCACTCTTCGTCATGCTGTCACACGTAATGGTCCATTGTGGATCATCTTCGCTCGTAGCATGATCATCACTCTCCAACAAGAGCTCATCATGAACAGCAACAAAACCATTGATGGAAGAGGTGTTGAGATCTACATTACTGGTACTGGTGGCATCACTATTCAGTATATCCAAAACATAATCATCCATGGGATTAAAATCTACAACATGCAGTCTGGTGAAGGTGGAACGATTATAGACTCTGAGCAGCATTATGGGCTTAGGACAAGGAGTGATGGTGATGGCATTTCCATCTTTGGTGGTAGCAATCTTTGGATTGATCATGTTTCCATGAGAAACTGCTCAGATGGACTCATTGATGTCATCATGGGTTCTACTGCTATTACTATTTCCAATAGCCATTTCACTGACCACAATGAGGTGATGTTGTTTGGTGCCTGGGACAGTTACTATCAAGATAAAATCATGCAAATCACTCTAGCATTCAACCATTTTGGAAAGAGATGTGTTCAAAGGATGCCAAGAGTAAGATATGGTTTTGTCCATAGTGTTAACAATGACTACACTCACTGGGAAATGTACGCCATTGGTGGTAACCAGAACCCAACCATTATTAGTGAGGGTAACCGATTCACTGGCCCGGACATATTATTCGCTAAAGAGATCACAAAGAGAGAATACACCGACGAGAAAGAATGGAAAAATTGGCAGTGGAGATCAATCAATGATTTGTACTTGAATGGTGCATTTTTCATTGAATCTGGCCCTGTACTTGTTGACAGACCATTCTCAAGGCAAGACATGATCACAGCCAAGCCAGGGAACTATGTAGGAAGGCTTACACGTTATGCTGGAAGCCTTAGGTGTAGAGTGGGTCAACCTTGTTAATTACTATTATTATTGCCCCTTAATTAATTCAATTCTCTTCCTTACAACAATACCTGTAATGACATGGCTAGGGTACAAAGAAATGACCAAGGCAATTTGCTTCTTATTCTTCTACTA 3668 0.4272 MANCHSVILLLSLVILIPSLNANILEHDEYWKSHAKEFDAYWQEKAEVAKAHSEAAYFTDPYAVSGNFTSTISELIIGGKTTRRNLKGRRDKGPCMATNPIDRCWRCDPNWANNRQKLADCVQGFGRNTVGGKGGPYYVVTDPSDGDLVNPKPGTLRHAVTRNGPLWIIFARSMIITLQQELIMNSNKTIDGRGVEVYITGGAGITVQYVQNIIIHGLKIYDILPGEGGMIRDSEGHYGFRTRSDGDGISVFGASNLWIDHVSMRNCSDGLIDVIMGSTAVTISNSHFTDHNEVMLFGAWDSYYQDKIMQITLAFNHFGKRCIQRMPRVRYGFVHSVNNDYTHWEMYAIGGSQNPTIISEGNRFTGPNLRFSKEITKREYTEESVWKSWQWRSINDEYLNGAFFVESGPQLANRPFSRQDMISAKPASYVGRLTRYSGSLRCRLNICAKVWISESLTSRSYNLDSVVDFGCWGETSRSLAISLLRGAAVSSDGESLKDWSIGPLDTPRTFAIGPKKDGSIFIFHSPNTSVNPVACFTTCPYKVLPSIIELISVIALLATSKSHSETVHNPFFSLMSPMSIPKIWLLICISFHYINGPVVLLRPLVTPSQESRTSTLTPMISVKILLQREIMDISLLAQRKPLALDRKLVKKFKAQYVIICLYHITSIALASVRQGKNESLRDFKKHDHSKALGAEWVNLFNYHYCHLIKLFVTKMPMMAWMGYKQLTKASKKWGSPYSLYSVVNNKGPSILVYLFVAAAKEEYWHSHVDEYDSYWQEKAKVAKAHSEAAYFADPYAVSGNFTSSISELIIGGKSTRRNLKGRHRGGPCIATNPIDRCWRCDPNWANYRQKLADCVQGFGRNAVGGKGGPYYVVTDPSDDELINPKPGTLRHAVTRNGPLWIIFARSMIITLQQELIMNSNKTIDGRGVEIYITGTGGITIQYIQNIIIHGIKIYNMQSGEGGTIIDSEQHYGLRTRSDGDGISIFGGSNLWIDHVSMRNCSDGLIDVIMGSTAITISNSHFTDHNEVMLFGAWDSYYQDKIMQITLAFNHFGKRCVQRMPRVRYGFVHSVNNDYTHWEMYAIGGNQNPTIISEGNRFTGPDILFAKEITKREYTDEKEWKNWQWRSINDLYLNGAFFIESGPVLVDRPFSRQDMITAKPGNYVGRLTRYAGSLRCRVGQPC 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00869 1181 Gene3D - 831 1174 IPR012334 -
Pste7g00869 1181 Gene3D - 98 441 IPR012334 -
Pste7g00869 1181 Pfam Pectate lyase, N terminus 36 86 IPR007524 GO:0030570
Pste7g00869 1181 Pfam Pectate lyase, N terminus 767 819 IPR007524 GO:0030570
Pste7g00869 1181 SUPERFAMILY Pectin lyase-like 832 1172 IPR011050 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 878 903 IPR018082 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 854 871 IPR018082 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 1152 1175 IPR018082 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 914 930 IPR018082 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 978 999 IPR018082 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 1122 1146 IPR018082 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 1058 1077 IPR018082 -
Pste7g00869 1181 PRINTS Pollen allergen Amb family signature 1080 1099 IPR018082 -
Pste7g00869 1181 SMART amb_all 173 370 IPR002022 -
Pste7g00869 1181 SMART amb_all 906 1103 IPR002022 -
Pste7g00869 1181 PANTHER PECTATE LYASE 18-RELATED 49 443 IPR045032 GO:0030570
Pste7g00869 1181 SUPERFAMILY Pectin lyase-like 99 438 IPR011050 -
Pste7g00869 1181 Pfam Pectate lyase 182 364 IPR002022 -
Pste7g00869 1181 Pfam Pectate lyase 915 1097 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00869 Pste-Chr7 8080224 8094257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00869 13 444 Polysaccharide Lyase AT1G14420 57.494 1.20e-173 518