LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste7g00862	TTGGCATTACCCTCTTTGGTTTACCCACAAGCTGATCAATCTAGGGCTCAAGCGGGGTTTAGTTTGGGAATTGGTCATCTGGGTCTGGGATTGTTGAGGGTGGATTTGGTGGTGGGGGTTGGGCATTGTAGGGGTGTTAGGGATTTGGGGTGGATGGGGTTGGGTGCTGAGAATGGTAAGGTGGTGGTGGAGTCTTTGGATGTGTGTAAATCAAAGGGGAGGAAGAAGAAGAAGAAAGAGGATGGGGAAGTTGAAGAGGAAGATACTGGGTGTTGGTTTAGGCTGAGGTTTATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAGTTAGTGGCACCAGCACTAATTATGCTGAAAGTAAGTCAACTAATGATACGAGTAGAGATCAACCAACTGTCCCAGTAGTCTCCTCGACAACCACAAGTAATGCTGAAAGCAATTCATCCACTTCAAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGGTTGCGAAAATTCACATTCAATGATCTAAAGTTGGCTACCAGAAACTTTCGGCCAGAAAGTCTTCTTGGTGAAGGTGGATTTGGTTGTGTTTTCAAGGGATGGATAGAAGAAAATGGAACTGCTCCTGTGAAACCTGGCACAGGGCTTACTGTTGCTGTAAAAACCCTGAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAGGTAAATTATCTTGGTGATCTAGTTCATCCTCACCTTGTTAAACTAATTGGTTACTGCATTGAAGATGATCAAAGGTTACTGGTATATGAATTTATGCCTCGGGGAAGCCTGGAAAACCACTTGTTTAGGAGGTCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCACTAGGAGCTGCAAAGGGTCTTGCTTTTCTTCATGAGGAAGCTGAACGACCAGTAATATATAGGGATTTCAAAACTTCCAATATACTACTGGATGCAGACTACAATGCTAAGCTCTCAGATTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACCCATGTGTCCACTCGTGTGATGGGTACCTATGGTTATGCAGCACCTGAATATGTCATGACGGGACATCTTACATCAAGAAGTGACGTGTATAGTTTCGGAGTGGTACTACTTGAGATGTTAACCGGCAGAAGATCTATGGACAAAAACCGACCCAACGGGGAACACAACCTTGTGGAATGGGCTAGACCACATCTCGGAGAGAGAAGAAGGTTCTACAGGTTGATAGATCCACGCTTGGAAGGTCACTTTTCCATAAAAGGAGCTCAGAAAGCCGCGCATCTGGCCGCTCACTGCCTTAGCAGAGATCCAAAAGCTAGACCCTTGATGAGTGAAGTTGTGGAAGCTTTAAAGCCTCTGCCAAACCTCAAGGACATGGCTAGTTCATCATATTATTTCCAGACGATGCAAGCCGACCGGTTTAGCGCAAGTCCAAACACCAGAAATGGTAGAACACAGGGAGCATTGCTCTCAAGAAATGGGCAACAGCAAAGGAGCCTATCAATTCCACATGGTACTCATGCATCTCCATATCACCATCAGTTTCCCCAACCATCACCAAAACCAAATGGCAAGGCATAGAGTTGATGAGTTTTCATTTTCTTTTACAACCCATCTTTTTCATCATTTCCCTTTTCCTAAGTATAGATGTCACTTGTGTCTAGCCAATTTGTTCATGGACAACTTGAGAGCAAAAGAAGCATGCATGCATTCATGCAATCATGCTTCTTTATGATGTATGTTGAGTGTTGACCTTAGGGCAGGTGAAGCTTATTCAGCTACCATGTCTTGTGTCAAATTGTCAACCAATATGTTCCTTCAGGTTGTTTCGAAATATTCAAGATTATTAACTCCTCAATTTTATTTTTTCATTTGCCCCCGGAAATATCTTTTGGTTTGGTTAGGCTTCACTTGTGCTATCAAACATTGCGGCTCCTTAAATTATCATCTACAGCCTTTTGTTTATGGAAATATGAAGAAAAAAACTTCATTGCAT	2026	0.4334	LALPSLVYPQADQSRAQAGFSLGIGHLGLGLLRVDLVVGVGHCRGVRDLGWMGLGAENGKVVVESLDVCKSKGRKKKKKEDGEVEEEDTGCWFRLRFIGSCISSRSKVDSSVSGTSTNYAESKSTNDTSRDQPTVPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGALLSRNGQQQRSLSIPHGTHASPYHHQFPQPSPKPNGKA	536

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste7g00862	536	MobiDBLite	consensus disorder prediction	485	514	-	-
	Pste7g00862	536	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	309	321	IPR008271	GO:0004672\|GO:0006468
	Pste7g00862	536	PANTHER	OS01G0588500 PROTEIN-RELATED	142	463	-	-
	Pste7g00862	536	MobiDBLite	consensus disorder prediction	485	536	-	-
	Pste7g00862	536	FunFam	Probable serine/threonine-protein kinase PBL8	266	481	-	-
	Pste7g00862	536	Gene3D	Phosphorylase Kinase; domain 1	139	265	-	-
	Pste7g00862	536	CDD	STKc_IRAK	186	463	-	-
	Pste7g00862	536	FunFam	Serine/threonine-protein kinase BIK1	147	265	-	-
	Pste7g00862	536	MobiDBLite	consensus disorder prediction	106	152	-	-
	Pste7g00862	536	Pfam	Protein tyrosine and serine/threonine kinase	184	460	IPR001245	GO:0004672\|GO:0006468
	Pste7g00862	536	ProSiteProfiles	Protein kinase domain profile.	180	466	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste7g00862	536	MobiDBLite	consensus disorder prediction	106	155	-	-
	Pste7g00862	536	ProSitePatterns	Protein kinases ATP-binding region signature.	186	218	IPR017441	GO:0005524
	Pste7g00862	536	Gene3D	Transferase(Phosphotransferase) domain 1	266	482	-	-
	Pste7g00862	536	SUPERFAMILY	Protein kinase-like (PK-like)	166	483	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste7g00862	Pste-Chr7	8022848	8026590	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste7g00862	127	460	Glycoside Hydrolase	AT3G07070	53.846	6.58e-117	350

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Pste7g00862		PK_Tyr_Ser-Thr	1.8e-45	CL0016