Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00848 ATGTTTGGTGCCTTGAATTCAGGATCAAAATCTGTTGTTAATGGTGTGAATGTGACGCATAGGCCCTTGTTTCAAGGGCTTGAGAAAGAGAACGTCGGTGAAGATGCTGATTTTGAGGTGTGCCTCCATCAACCAGGTAAGAAAAGGAGGCTCACAAGCGACCAAGTGCAGTTCCTTGAAAGCAACTTCGAGGTAGAAAACAAACTTGAACCTGAAAGAAAGATCCAACTTGCAAAGGACCTTGGCATGCAACCAAGGCAAGTTGCCATATGGTTCCAAAACCGTAGGGCAAGGTTTAAGACCAAACAGCTTGAAAAAGACTATGGCGTTAATTCTCTGAAGAGCAGGTTGATTCCTATACAGAAAGAGGAAGAGAATTTGGATGATGATACAAGCTGTGGTGCTGACAACTCACAGAATAAAGAGCAGAAGGATTTAAGAAAAAACACAACAGGTTCTGAAAATGGATCCAAAGGGCTACTTCCTGTTATGGTAACAAGCAAACAGGAAGATGCTAACTCAGCTAAAAGTGATGTGGTTGATTCTGAGAGTCCACATTTCGCTGAGGGAAACCAATCCTCAGTAATGGACCCTGCAGATTCTTCCCATGCTTTGGAACCGGACCACTCAGATTTCTCACAAGATGAGGAAGACATCCTCAGCCAGAACATCTTGACCATGCCCTTTTTCTTACCAAAGGCTGAAGATGTCTGCTACCATGAACCACCTGAAAATTGTTGCAGTTTCCGGTTCCCAGTTGAAGATCAAACCTTCTGTTTTTGGTCTTATTGAGTTACTACTTACTACTACCAAGGGAATGTTAAGTTTGCAGTTGTAATTTTGTACTAGAATGTTCTTGTAATTGAAGTTAATCTGCATAATAATCTGCCTAGTAAAGAGGA 902 0.4191 MFGALNSGSKSVVNGVNVTHRPLFQGLEKENVGEDADFEVCLHQPGKKRRLTSDQVQFLESNFEVENKLEPERKIQLAKDLGMQPRQVAIWFQNRRARFKTKQLEKDYGVNSLKSRLIPIQKEEENLDDDTSCGADNSQNKEQKDLRKNTTGSENGSKGLLPVMVTSKQEDANSAKSDVVDSESPHFAEGNQSSVMDPADSSHALEPDHSDFSQDEEDILSQNILTMPFFLPKAEDVCYHEPPENCCSFRFPVEDQTFCFWSY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00848 263 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 39 199 IPR045224 GO:0003700
Pste7g00848 263 ProSitePatterns 'Homeobox' domain signature. 77 100 IPR017970 GO:0000981|GO:0006355
Pste7g00848 263 FunFam Homeobox-leucine zipper protein HAT5 40 104 - -
Pste7g00848 263 MobiDBLite consensus disorder prediction 152 173 - -
Pste7g00848 263 PRINTS Lambda-repressor HTH signature 73 82 IPR000047 GO:0003677
Pste7g00848 263 PRINTS Lambda-repressor HTH signature 82 98 IPR000047 GO:0003677
Pste7g00848 263 SMART HOX_1 44 106 IPR001356 GO:0003677
Pste7g00848 263 Gene3D - 41 108 - -
Pste7g00848 263 MobiDBLite consensus disorder prediction 122 214 - -
Pste7g00848 263 Pfam Homeodomain 47 100 IPR001356 GO:0003677
Pste7g00848 263 SUPERFAMILY Homeodomain-like 40 104 IPR009057 -
Pste7g00848 263 CDD homeodomain 45 103 IPR001356 GO:0003677
Pste7g00848 263 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00848 Pste-Chr7 7889818 7891475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00848 47 134 Homeobox Transcription Factor Family AT5G65310 62.222 1.42e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pste7g00848 Homeodomain 5.9e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00848 7 7889818 7891475 Pste7g00848 7 7889818 7891475 ECH
Pste1g00955 1 2994568 2996722 Pste7g00848 7 7889818 7891475 PCT
Pste7g00848 7 7889818 7891475 Pste1g00683 1 2156382 2158431 PCT