Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00836 AAAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGTAGGCATAGCAAGCATGGGGAGGGCTCCTTGCTGTGACAAAGCGAGTGTGAAGAGGGGTCCATGGTCGCCTGAAGAAGACGCCAAACTCAAATCTTATATTGAACAGCATGGCACCGGTGGCAACTGGATAGCATTGCCCCAGAAAATAGGCCTCAAAAGATGTGGAAAAAGCTGTCGCCTGAGATGGCTGAACTATCTTCGTCCAAACATCAAACATGGAGGTTTCTCAGAAGAAGAAGACAACATAATTTGTAGCCTCTATGTTAACATTGGAAGCAGGTGGTCTATTATAGCAGCGCAATTACCAGGGCGCACAGATAATGATATAAAGAACTATTGGAACACTAAACTGAAGAAGAAGCTACAAGGCAAGCAATGGAAGGAGCATCAGGCTCAAGCTCGCAAAGTTTGCAGTCTAAAGCAAGAGATCAAGAGAGAAAGTGAAGATTCCATGCTAGCTGTGGGAGTTATTACCCGAACTCCCTATTGGCCTGAGCCTGAACATTCTTGGCCCATTCCAGTGGCCAATGCCTCCCATCTCAACAATCAAACATCATCCATCGAACACTTCCCCAACACCATAGCCACTGCCATCATCAACTCACACTGCTTATCATGTGAAAATTCCTTAGCACAAGACCAGCTATACCCCTCCACAATCAACATGATAGCCACGGACACGTGTCAAACATCAAACCTATTTCAAGGGTTTGGGAACTTTCCAAATGAATCGACCTGTGTGAACCCGCAACAAATAGATGGAGCAATGAGGGTCTTTTATGGGTTGGACTCAATGGACGTGGCAAACGGTAGCACAAACACGACTTCAACAGAAAGCACTAGTTGGGGAGACATAAGCTCTTTTGTTTACTCACCCTTTGTTTCTGATTTCCGAGGTTCCCAACAAAGAATACCACCAGATGTTACTTTCGAGGAGTCTAGTTACTTTGCGATTCAACCTCAATAA 1005 0.4547 KERERERERGREVGIASMGRAPCCDKASVKRGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLQGKQWKEHQAQARKVCSLKQEIKRESEDSMLAVGVITRTPYWPEPEHSWPIPVANASHLNNQTSSIEHFPNTIATAIINSHCLSCENSLAQDQLYPSTINMIATDTCQTSNLFQGFGNFPNESTCVNPQQIDGAMRVFYGLDSMDVANGSTNTTSTESTSWGDISSFVYSPFVSDFRGSQQRIPPDVTFEESSYFAIQPQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00836 334 Gene3D - 86 162 - -
Pste7g00836 334 Gene3D - 24 85 - -
Pste7g00836 334 SUPERFAMILY Homeodomain-like 28 126 IPR009057 -
Pste7g00836 334 ProSiteProfiles Myb-like domain profile. 80 130 IPR001005 -
Pste7g00836 334 SMART sant 84 132 IPR001005 -
Pste7g00836 334 SMART sant 30 81 IPR001005 -
Pste7g00836 334 CDD SANT 33 79 IPR001005 -
Pste7g00836 334 FunFam Transcription factor MYB36 87 158 - -
Pste7g00836 334 Pfam Myb-like DNA-binding domain 31 79 IPR001005 -
Pste7g00836 334 Pfam Myb-like DNA-binding domain 86 128 IPR001005 -
Pste7g00836 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 79 IPR017930 -
Pste7g00836 334 PANTHER OS09G0431300 PROTEIN 18 279 - -
Pste7g00836 334 FunFam Transcription factor RAX3 24 85 - -
Pste7g00836 334 CDD SANT 88 128 IPR001005 -
Pste7g00836 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 134 IPR017930 -
Pste7g00836 334 ProSiteProfiles Myb-like domain profile. 26 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00836 Pste-Chr7 7761070 7762388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00836 18 304 MYB Transcription Factor Family AT3G49690 46.626 3.61e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g00836 Myb_DNA-binding 1.7e-14 CL0123