Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00824 CTTTGCCCCCACAAAAAGTCACATTCTTAACACCCTTGTGACTTGTGTGCTCCCATCACACTTTATAAAATCACACCATCATCTAATCATCATCTAAACTAAACCCCTCTCTCTTCATTCATTCTCTTCTATTCACCTTATGATGGGTCTTGATCACGATGCCGGCCTTCACCTTATTCTAGGATTAGCTTTGACTGCAGCCACACCGCAAGACACCATCACTCCCACTCCATCACCACCTTCCTCCAAGCTTGATCATCGTATTACTCTTAGGCCAACAAAGCCCTATTCCTCTAAATCCAATCTCATCACTACCACCTCCGAGGCCGAGCCATCCTTAACGTTGGGTCTCTCCCGTGACAGTTACCGCCACCAGGGGCTCAAACTTCCCAAAAACAAAGTCTCCTCTGATGACCCTCTTGACTTGTCCACACACACTTCGCCTCACAGTGCTATTTCTTCCTTCTCCACTGCCAGGGTCAAGAGGGAGAGGGATCTTAGCTCTGAAGAACTCGATGCTACAGAGACTGAGAGGCTTTCTTCAAGAGCCAGCGACGAAGAAGAAGATGCCACCACCGCCGCCAGAAAGAAACTTCGGCTTACCAAACAACAATCTGCTTTGCTTGAAGAAAGCTTCAAACAACATAGCACCCTCAATCCTAAGCAGAAGCAAGCTTTGGCCAAGCAGTTAAGCCTACGGCCACGACAAGTTGAGGTGTGGTTTCAGAACAGAAGAGCCAGAACAAAGCTGAAGCAGACGGAGGTGGACTGCGAGTTCCTAAAGAAGTGTTGTGAAACACTGACAGAGGAGAACAGACGGTTACAGAAGGAGCTGCAAGAGCTGAAGGCACTGAAACTGGCGCAGCCTTTGTACATGCCTATGCCTGCAGCAACCCTCACCATGTGTCCCTCTTGTGAGAGGCTCGGCGGCGCCGTCAACGGTGGTGCTTCCCCCAAGACACCATTCTCTATGGCTCCAAAGCCTCACTTCTTCAACCCCTTTGCAAATCCTTCTGCGGCATGTTGATTGATTTTTATCATTAGGCTTTTAGTATTCACTCTCAGAATTCCAGGGGAAAAAAAAAAAAAAAAAAAACAACAACAACCAAACAAGAGTTCCCCCACAACCTTTGTATTTTTTTGGTTGAGGGATACGTCTTATGAACTACATCAGCCAGTGAAAAGGTTAAGGGTGTAATTAACTAATACTGTAGAAATTTGTAACTGCTGATCAAGATTACTTTTTTACTTTTCCTTCGTTAATGTATGTTTATAAATCATTATATATAGAAGACATCGATCTATCTATGAAAGAATTAATGACTATTTTTATTTTTTATTTTCCATCGTTGTAACTTAATTGTAATGGTACA 1373 0.4428 MMGLDHDAGLHLILGLALTAATPQDTITPTPSPPSSKLDHRITLRPTKPYSSKSNLITTTSEAEPSLTLGLSRDSYRHQGLKLPKNKVSSDDPLDLSTHTSPHSAISSFSTARVKRERDLSSEELDATETERLSSRASDEEEDATTAARKKLRLTKQQSALLEESFKQHSTLNPKQKQALAKQLSLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLQKELQELKALKLAQPLYMPMPAATLTMCPSCERLGGAVNGGASPKTPFSMAPKPHFFNPFANPSAAC 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00824 295 MobiDBLite consensus disorder prediction 47 62 - -
Pste7g00824 295 Pfam Homeodomain 149 203 IPR001356 GO:0003677
Pste7g00824 295 Pfam Homeobox associated leucine zipper 205 239 IPR003106 GO:0006355|GO:0043565
Pste7g00824 295 ProSitePatterns 'Homeobox' domain signature. 180 203 IPR017970 GO:0000981|GO:0006355
Pste7g00824 295 Gene3D - 153 203 - -
Pste7g00824 295 SMART halz 205 248 IPR003106 GO:0006355|GO:0043565
Pste7g00824 295 MobiDBLite consensus disorder prediction 91 111 - -
Pste7g00824 295 Coils Coil 211 241 - -
Pste7g00824 295 MobiDBLite consensus disorder prediction 23 62 - -
Pste7g00824 295 ProSiteProfiles 'Homeobox' domain profile. 145 205 IPR001356 GO:0003677
Pste7g00824 295 CDD homeodomain 149 206 IPR001356 GO:0003677
Pste7g00824 295 FunFam Homeobox-leucine zipper protein 18 133 210 - -
Pste7g00824 295 MobiDBLite consensus disorder prediction 112 146 - -
Pste7g00824 295 MobiDBLite consensus disorder prediction 83 146 - -
Pste7g00824 295 SUPERFAMILY Homeodomain-like 148 213 IPR009057 -
Pste7g00824 295 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 53 270 - -
Pste7g00824 295 MobiDBLite consensus disorder prediction 23 37 - -
Pste7g00824 295 SMART HOX_1 147 209 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00824 Pste-Chr7 7670914 7672705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00824 2 295 Homeobox Transcription Factor Family AT4G37790 56.352 5.34e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste7g00824 Homeodomain 5e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01807 1 5538544 5540294 Pste7g00824 7 7670914 7672705 PCT