Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00797 AGAAAATGGGATTAACATATTCACACGGATCAGTAGAGAAGCGGGTACCAAGCGTGTACGTGCCCCTTTATAAAACACTCTCAGTTTCCACCAAATTCTTGCAACGTAGCCCATCTTCCACAACCACAACCAAACACTTCGTCATCTTTCTTGCCCTTCTACCTTTCCCTCCTCAATCAAGCTAAGGTAACCTTTTCACTCTGCTTTGCAAACACGTCACTCTCATAATTCTCCATTTCAGCCAGAACTTAGATCATCTTCTCCCTTCTATTTTGCCTCCAAATTCATTTCTTCCTCTGGTACGCCCCATATACCAATAGAAGAGAACTAGCTGCAAGATGACTCAAATTTCGTCCACAGTGTACATTCCTGAATTTGGAATGGAGGACCCCAGTTTGTTTAATCAGTACTACCCGATGGATTCATTTGCATTCCAGCTCGAAGATCTTGACTTTGAGTCACTCTCCGCGTCCCCAAAGAGCTCTTCCTCTCACAAGAGGTTAAACTCCGAAAGCCCTCAGAACTCTTTTCTCACTCAAAGTCCTGAAAATTCTGTTGCCCCATCAAGACCAACCAAGCAACCCAAGACAGTGAGTACCTGGAGTGCTTACGGTACTGACATGATGGCTCCCAAGGCTTCTTCTTCTTCATCCTCCAAAATCATCTCTTTTGAGAACTCCAATGCATCTTCGGTTACTTCTCAACACCTCTATAATCTGGATGCTGCTGCCAAAGTGAAGAAGCCTAAAATTGAAACTGGGTATGGTGAAAACTTGGATTTTGCTGCCGCTGCTTCTCAAAGTGCCTACGACAACAACAGCTTTCTAGACTATTATAAACGAGAGAAAAAGGCTGCAACTACAGCAACTAGAAACCCAACCCAAGCTCAAGATCACGTAGTAGCTGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTCATTGCTCTCTCGGCCATAGTTCCTGGACTCAAGAAGATGGACAAGGCCACCGTGTTGGAAGATGCTATAAAGTACGTGAAAAAACTGCAGGAACGGATAAAAACTCTGGAGGAAGAAGCTGTGGATAAAACAGTTGAATCAGCAGTCTTTGTGAAGAGATCTGTTGTATTCGCTGGTGATGATAGCTCTTCCCCCAGTGAAAACTCCGATCAGTCACTCCCCGAAATCGAAGCAAGAATTTACGGCAATGAGGTACTAATCAGAATCCACTGCCACAAACACAGTGGAAAAGCAGCTGCTATACTAAGGGAATTAGAGAAGCATCATCTCATAGTTCAGAGTAGCAGCTTTTTACCCTTTGGGACTGATACTATTGACATAACTATTGTTGCTCAGATGAACAAGGACTACTGCTTGACAGCAAAGGATCTCATAAAAAGCTTAAGTCAGTGTTTGAGGCAGCTTTGATAGTGAATAATTAACCATTTCAAGACATTCACTGATCTAGCTACATTATGGAAGATTATGTGCATGCATGACTATAGGAACAAACTTAAATAATGACTTTTTTTTATCGCAGTGCTTCCTTTTTCCCTAGTCCTTCATCTGGATTTGGAGTATTATATCAATGGCCTGCGACTGCAACTGTCTCCTCATCTACCTTATAGTTTATTTTGGTCTGTTCTGCTGTAGAGTTCAAGATAATGTCAAGTGTTTTCCTTTTTCACCATATTTTTTTGCGTAGTTGTTGATTAGCTGCGTTAATATACCCGATAGTGGCATTTTCAAATCTCCACAGCAGTTGTTGTTGTTGTTGTTTTATTTTTATTTTTTTAAGAGGGATTTTTTATAGGATTTGACTATTCAAATAGACCTCTTTCTTCCCTCTTTCCTTTGTGAACAGGATCCAGTTTCATTGAAAATAATGCTGGCAGCATTTATTTATATTGTTCTCTATGTCCGATTGTGATTATCATTTCTGTATAAAATTATTATTTTTAGTAAATG 1949 0.4064 MTQISSTVYIPEFGMEDPSLFNQYYPMDSFAFQLEDLDFESLSASPKSSSSHKRLNSESPQNSFLTQSPENSVAPSRPTKQPKTVSTWSAYGTDMMAPKASSSSSSKIISFENSNASSVTSQHLYNLDAAAKVKKPKIETGYGENLDFAAAASQSAYDNNSFLDYYKREKKAATTATRNPTQAQDHVVAERKRREKLSQRFIALSAIVPGLKKMDKATVLEDAIKYVKKLQERIKTLEEEAVDKTVESAVFVKRSVVFAGDDSSSPSENSDQSLPEIEARIYGNEVLIRIHCHKHSGKAAAILRELEKHHLIVQSSSFLPFGTDTIDITIVAQMNKDYCLTAKDLIKSLSQCLRQL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00797 356 SMART finulus 187 236 IPR011598 GO:0046983
Pste7g00797 356 CDD bHLH_AtNAI1_like 183 255 - -
Pste7g00797 356 Gene3D - 172 245 IPR036638 GO:0046983
Pste7g00797 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 241 IPR036638 GO:0046983
Pste7g00797 356 Coils Coil 220 247 - -
Pste7g00797 356 Pfam Helix-loop-helix DNA-binding domain 185 231 IPR011598 GO:0046983
Pste7g00797 356 MobiDBLite consensus disorder prediction 43 86 - -
Pste7g00797 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 230 IPR011598 GO:0046983
Pste7g00797 356 PANTHER BHLH TRANSCRIPTION FACTOR 25 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00797 Pste-Chr7 7375962 7379047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00797 80 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.141 1.18e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00797 HLH 3.6e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00797 7 7375962 7379047 Pste7g00797 7 7375962 7379047 ECH