Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00792 TGTTCGTACAATATATCAGCTTTGAATAGCAAAAGGAGCAAGTCAGTTTGTAGTGTACAGAAACAGAAAGTGTTGCTGTGGATTGTGATGGAGGAATTGAACAAGCCATTGGATGCATCCGCAGCCAGCTGGTTATCTGATTTGGAAATAGATGATTACAATTTATTTCCTGATGAATGTCCCTTGAACATGAACTTGTTTGACGAACAAGAGTTTCTTTCACAAGACATTGCTAGTGCCCTTGAAGAACAGACACAGACCCTCCAGCAATCTCTATCTTCTGAGTGCCCTTCCATAACTGTGTGCAACTCATCAACCGATGAAACCAATTTTGACTTTGACAGACCAGCCAAGATGCTGAAAACGACAAGTAGTAGTTGTAACTCTGACTCATCCACCATCACCAAGACCCTTTCACCCAAACTTTCCCCATCTTCATCCTTCTCCTCCTTCCAATCTCAGATTCTCTCTTTTGACAACCCAAACTCATCATCCCCTTCCACCACCCAGTTTTACGGGTTTGACTGTACCTTAAACCAATCACAGAACGAGATGGGGTCAGTGTCAGTGCCCCAATTGGGGAAACAACGCTTCCCAACTCAAACTCCAAAAGGGTCACCAAAAAATCAAAACTTTGACACAAAAACCTCACATGGTAAGAGGTCTCCAGCTCACGCTCAGGATCACATCATGGCCGAAAGAAAGCGAAGAGAGAAGCTCAGCCAGAGCTTCATTTCTCTTGCAGCTCTTGTTCCTGGCCTGAAGAAGATGGACAAGGCTTCAGTGCTAGGGGACGCTATAGAATATGTGAAGGAGCTTAAAGAGAGGTTAGCAGTGCTGGAAGAGCAGAGGAAGAAAACGAAGGAAGAATCGGTGGTGATTCTGAACAAACCAGACCTCTCTGGCGATGGTGATGATGATTCTTCTTCATGTGATGAGAGCATTGATGCTGATAGTGTGAGAGACTCACTGTTCGAAGTTGAATCAAGAGTGTCAGGGAAGGAGATGCTGCTTAGGATCCACTGCCAGAAGCAAAAGGGTCTTCTCGTCAAATTACTAGCTGAGATTCAGAGTTATCACTTATTTGTTATTAATAGCGGTATCTTACCCTTCGGTGATTCTATCATTGACATTACAATAGTTGCTCAGATGGGGGAAAGTTACAATTTGACTAGGAAGGAACTTGTCAAGAACCTACGCATGGCAGCCATGAAGATAATAATGTCATGATATAAACGTGGCACGAGTATGGGAGATGTCTTCAAGAATCAAGACACATGGATTGAAACTCTGAGCATTTAATGCGCCAATGACCGAGTAAATCTCACCCAAAATGGAAGCCTTTCTATAAATGTGTGATTTCTGCACCACCCTGCCATGTTCCCCATTGTGTTGTTGTAGATTTGGTTCGATCACAAATGATCTTGTCTTTTCCGTGTAATGTTTGCTTTCTCAGGCCTTGTATGCCTGTTTGACAGGCAAAAATAATTCAATATTTGTGGAGAATCAGATATATTAGGAATAACTTCTATCTTACGTGAGCATAACTAGAGAGATTAGAAGTGGGTAGTTATGACTTGAAGAAAGACATGTATCAAAGTTGATTTGGTGTGATTCAATCCTTGGATGGAGAGAAACATTCACCATAAAACAGTTAGAGTGAATATGAATGATCTTTATTTAAACACAATGAATTGTGC 1700 0.4182 CSYNISALNSKRSKSVCSVQKQKVLLWIVMEELNKPLDASAASWLSDLEIDDYNLFPDECPLNMNLFDEQEFLSQDIASALEEQTQTLQQSLSSECPSITVCNSSTDETNFDFDRPAKMLKTTSSSCNSDSSTITKTLSPKLSPSSSFSSFQSQILSFDNPNSSSPSTTQFYGFDCTLNQSQNEMGSVSVPQLGKQRFPTQTPKGSPKNQNFDTKTSHGKRSPAHAQDHIMAERKRREKLSQSFISLAALVPGLKKMDKASVLGDAIEYVKELKERLAVLEEQRKKTKEESVVILNKPDLSGDGDDDSSSCDESIDADSVRDSLFEVESRVSGKEMLLRIHCQKQKGLLVKLLAEIQSYHLFVINSGILPFGDSIIDITIVAQMGESYNLTRKELVKNLRMAAMKIIMS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00792 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 273 IPR011598 GO:0046983
Pste7g00792 409 Pfam Helix-loop-helix DNA-binding domain 228 273 IPR011598 GO:0046983
Pste7g00792 409 MobiDBLite consensus disorder prediction 214 235 - -
Pste7g00792 409 Gene3D - 214 291 IPR036638 GO:0046983
Pste7g00792 409 Coils Coil 263 290 - -
Pste7g00792 409 MobiDBLite consensus disorder prediction 186 235 - -
Pste7g00792 409 SMART finulus 230 279 IPR011598 GO:0046983
Pste7g00792 409 MobiDBLite consensus disorder prediction 186 213 - -
Pste7g00792 409 PANTHER BHLH TRANSCRIPTION FACTOR 75 405 - -
Pste7g00792 409 CDD bHLH_AtNAI1_like 225 297 - -
Pste7g00792 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 229 290 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00792 Pste-Chr7 7274403 7276570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00792 115 407 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.867 4.16e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00792 HLH 2.4e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00792 7 7274403 7276570 Pste7g00792 7 7274403 7276570 ECH