Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00791 TTTGGGGCAATCACAGATGATGATTGATGGTGATCAGAGACCAACTCAAGATGAAGCCTTGGCATATCTCAAGGCAGTAAAAGACACGTTTCCAGATAAGAGGGAAAAGTATGATGAATTTCTGAATATCGTGAAGGATTTCAAGGTTCAAAGGTGTGAATATGTTGAAATGGAACGGTTAGTTGGCAGAAGTGTGGAGAGGGCGTTGGCTGAGAGGGTGAGGGGCAGATTCTGCTTTGTGGCAATGGTTGAGATGATTGGACTCTATTATCCGACAATGGAGAGGAAAAGGCGGATTGCGCAGGGCTTTTATGGGTGTTGTCCGTTGGGGCATCCGGGTCTAATTTCGGGATTTAACACCTTCTTGACTAATGGACATGAAATTATACTTCCATTGGAGGATGAGCAACCACCCCAAAAGAAGCCAGTTGAACTCGCAGAAGGCATAAATTTCTTGGGCAAAACTAAGAGAGAAAGGATCACAGCTTCAAACGGTGATTGTGACCTCAGTGCTGGCCATTCTGATACAGAATCTGACAGGTGTTTGATGAATGCTGATAAGGATAAGGGGAGGCATGGTTCAAAGGAAAAGAACTATAAAGAAGAGAGAGACAGGAGACAATGGAAAAAGGATGATAGAGATTATGATCATGATGGTAGTGGGGAGCATTTATCTAACAAGCGGAGTTGTTGTAGTGCTAAAGCCTCTGGCATGTTGCATGAAATTCATCCGGCGTTTCGTTACCTTGACAAAGTGAAGGAGAAACTAAGCAATTCTGAGGATTTCCAGGAATTTTTGAAGTACCTACATGTATACGCCAGGAAAATAATTACCCGACAAGAATTGCAACTATTGGTGGGCAATTTACTGGGAAAATATGCAGATCTTATAGACGGATTGGATGAATTTGTGGCACAATGTGAGAAGTATGACGAACTCCTTGCCGGCGTCATAAATAAAAGGTTAGCCTCTTCCGTCTCCGTTTTGGGGCTGGAAACGTCGTTCAAACCTTTCTCAATTTCCTTCGGTTATATCTTCTTCGTTTCGTTCTTAATGAAGAGGTCTAGGGATGGTGTTTGCACGAGTTCACCACGCAAAGCGTGCATGGTGCCTTCTCCGGGAGAATCCTCGGGGCTACCACAGATGGTGATTGGTTGTGATCAGGCACCAACCCAAGATGAAGCCTTGGCATATCTCAAGGCAGTAAAAGACATGTTTCCAGATAAGAGGGGAAAATATGATGAATTTCTGGAAATCATGAAGGATTTCAAGGCTCAAATAATTGATACAATTGGTGTCATAGAAAGGGTGAAGGAGCTGTTTAAACAGCACATGGATCTAATTTTGGGATTTAACACCTTCTTGCCAAATGGATATGAAATTATACTTCCATTGGAGGATGAGCAACCACCCCAAAAGAAGCCAGTTGAACTCGCAGAAGGCATAAATTTCTTGGGCAAGATTAAGGGTCATTTTCAAGGCAATGACCATGTTTATAAGTCATTTGTAAACATATTAAAAATGTACAGAAAGGGAACCAAGTCTGTCACTGAGGTTTACCATGAGGTTGCTGCACTTCTCCAGGACCATGCAGATCTTCTTGAGGAATTTACCCATTTTCTTCCTGATAGGACAAAAATAGTCTCTACTCACCATGATTCTGCTCAAAGTTCTCTTCTTCATGTAGAAAAGAGAGAAAAGACCATAGCTTCACTCGTTTATTGTGACCTCAGTGCTGACCATTCTGATCCAGAACTTGACAGGCGTTTCATGAAGGCTGATAAGGATCAGGCGAGACATGGTTCAAAGGAGAAGAACTGTATGGAAGAGATAGATAGGAGACAATGGAAAAGGGATGACAGAGATTATGATCATGATGATAGTTGGGAGCATTTATCTCACAAGCCGACTGGTTGTAGGGCTGAAAACTCTGGTGCTGAACCATTGCATGATACTGATAAGGATCAGGCGAGACATGGTTCAAAGGAGAAGAACTGTATGGAAGAGATAGATAGGAGACAATGGAAAAGGGATGACAGAGATTATGATCATGATGATAGTTGGGAGCATTTATCTCACAAGCCGACTGGTTGTAGGGCTGAAAACTCTGGTGCTGAACCATTGCATGATACTGATAAAAATTTTGGCATGCATCCTATCTCATTTGCTTGTGAGGATATAAGTTCTTTGAAAAGTATTTGTAATCTGGTGTTTCATTACTTTGAAAAAGTCAAGGAGAAACTACAAAATCCTATGGATTTCCAGGAATTTTTGAAGTACCTACATGTCTACAGCAGGGAAATCATTACCCAACAAGAATTGAAATTATTGGTGAGCAATTTACTGGGAAAATATGCAGATCTTATGGACGGTTTTGATGAACTTTTGGCACAATGTGAAAAGAGTGGACATGGTCCAAAACTACCAATAAAGGTAGAGGAAAGGGACCGAGATCGTGACACGGATGATGGGTTAAAAAGTAGGGATTGCAAATACCTACAAAGGAACAAGTCCAATGCAGCTGCTAACAAGGATGCTTCAGTTCCTATGATGTCTCCATATGTCACCAAGGATAAGTATGCAATGAAACCTATAAGTCAGCTGGACCTTTCTAACTGTGAACAATGCACTCCTAGTTATCGCCTTCTACCAAAATATTACCCAATACCACTAGCCAGCCATCGAACGGAACTTGGTGCAGGGGTGTTGAATGATCACTGGGTTTCTGCTATATCTGGCAGTACTAAATGTTCCTTTAAACACAGGCAGATAAATCAGTATGAGGAGAAATTGTTTATATGTGAAGATTACAGGTTTGAACTTGATCTGTTAATAGAGTCTGCAAAAGTGACAATTAAACGAGTTGAGGAGCTCTTAGAAAGGATTCATGCCAATAGTATTGAAGGAGACAGTCCAATTCGTATTGAGGAACACCTAACAACTCCAAACCTGATGTTAATCGAACAAATATATGGTGATCATGGGCTTGATGTAATCGACATAATAAAGAAGAATGCATCTTTAGCTTTACCAGTCATATTAAGCCGCCTGAAGCAGAAACAGGATGAGTGGGTTAGGACCACCGATTGTTTTAATGAATTTTGGGCAGAAATAAAAGCAAAGAACTATCGTAAATCACTTGATCACCGTAGTGTCTACTCTAAGCAGCAGGATACAAAAGGTTTGAGCCCTATAGCCTTACCAAAAGAAACAGAGGAAATTAGAGAGAAGAAACGAAAAGAAAATGATGTTATTCTTGCAATTGGTGCTGGAAATGGACAGCCTATTACTCCTCTATTGGAATCTGTGTATCCAGATATTGAGATTCATGAAGATGATCCTAAGGATACAGAAAATGTTATAAAGGCTAAGGATATTTCTGCCAAAAATGGTACTGGAACGACTGGGTCGATCTACCATGACGAAAATGTTTCTTTAAAAGAATCATATTCCTACAAATGGCAAACAGATGAGGAGGATCATAAGGATTACAAAACAGGGCAAAATGAATATAATGCAGCTATTCCTGATGAAGCATCAAGAGCCAAAACACATGATCATTCCTTTGAACAGTTGGTGAATGCCAACATCTCACTGTCCTCTGGTGTGGAGCAAAGTAATAGAAGAACAAATTTGGCTAATATA 3646 0.4065 MMIDGDQRPTQDEALAYLKAVKDTFPDKREKYDEFLNIVKDFKVQRCEYVEMERLVGRSVERALAERVRGRFCFVAMVEMIGLYYPTMERKRRIAQGFYGCCPLGHPGLISGFNTFLTNGHEIILPLEDEQPPQKKPVELAEGINFLGKTKRERITASNGDCDLSAGHSDTESDRCLMNADKDKGRHGSKEKNYKEERDRRQWKKDDRDYDHDGSGEHLSNKRSCCSAKASGMLHEIHPAFRYLDKVKEKLSNSEDFQEFLKYLHVYARKIITRQELQLLVGNLLGKYADLIDGLDEFVAQCEKYDELLAGVINKRLASSVSVLGLETSFKPFSISFGYIFFVSFLMKRSRDGVCTSSPRKACMVPSPGESSGLPQMVIGCDQAPTQDEALAYLKAVKDMFPDKRGKYDEFLEIMKDFKAQIIDTIGVIERVKELFKQHMDLILGFNTFLPNGYEIILPLEDEQPPQKKPVELAEGINFLGKIKGHFQGNDHVYKSFVNILKMYRKGTKSVTEVYHEVAALLQDHADLLEEFTHFLPDRTKIVSTHHDSAQSSLLHVEKREKTIASLVYCDLSADHSDPELDRRFMKADKDQARHGSKEKNCMEEIDRRQWKRDDRDYDHDDSWEHLSHKPTGCRAENSGAEPLHDTDKDQARHGSKEKNCMEEIDRRQWKRDDRDYDHDDSWEHLSHKPTGCRAENSGAEPLHDTDKNFGMHPISFACEDISSLKSICNLVFHYFEKVKEKLQNPMDFQEFLKYLHVYSREIITQQELKLLVSNLLGKYADLMDGFDELLAQCEKSGHGPKLPIKVEERDRDRDTDDGLKSRDCKYLQRNKSNAAANKDASVPMMSPYVTKDKYAMKPISQLDLSNCEQCTPSYRLLPKYYPIPLASHRTELGAGVLNDHWVSAISGSTKCSFKHRQINQYEEKLFICEDYRFELDLLIESAKVTIKRVEELLERIHANSIEGDSPIRIEEHLTTPNLMLIEQIYGDHGLDVIDIIKKNASLALPVILSRLKQKQDEWVRTTDCFNEFWAEIKAKNYRKSLDHRSVYSKQQDTKGLSPIALPKETEEIREKKRKENDVILAIGAGNGQPITPLLESVYPDIEIHEDDPKDTENVIKAKDISAKNGTGTTGSIYHDENVSLKESYSYKWQTDEEDHKDYKTGQNEYNAAIPDEASRAKTHDHSFEQLVNANISLSSGVEQSNRRTNLANI 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00791 1210 SMART hdac_interact2seq4b 867 967 IPR013194 -
Pste7g00791 1210 SUPERFAMILY PAH2 domain 465 538 IPR036600 GO:0006355
Pste7g00791 1210 ProSiteProfiles PAH domain profile. 233 302 IPR003822 GO:0006355
Pste7g00791 1210 PANTHER SIN3B-RELATED 105 306 IPR039774 GO:0003714
Pste7g00791 1210 Gene3D Paired amphipathic helix 467 540 IPR036600 GO:0006355
Pste7g00791 1210 MobiDBLite consensus disorder prediction 167 219 - -
Pste7g00791 1210 ProSiteProfiles PAH domain profile. 469 539 IPR003822 GO:0006355
Pste7g00791 1210 MobiDBLite consensus disorder prediction 802 821 - -
Pste7g00791 1210 Gene3D Paired amphipathic helix 233 304 IPR036600 GO:0006355
Pste7g00791 1210 Gene3D Paired amphipathic helix 728 796 IPR036600 GO:0006355
Pste7g00791 1210 ProSiteProfiles PAH domain profile. 8 120 IPR003822 GO:0006355
Pste7g00791 1210 FunFam Paired amphipathic helix protein SIN3 724 796 - -
Pste7g00791 1210 ProSiteProfiles PAH domain profile. 725 794 IPR003822 GO:0006355
Pste7g00791 1210 Coils Coil 940 960 - -
Pste7g00791 1210 FunFam Paired amphipathic helix SIN3-like protein 468 539 - -
Pste7g00791 1210 MobiDBLite consensus disorder prediction 641 665 - -
Pste7g00791 1210 Gene3D Paired amphipathic helix 389 451 IPR036600 GO:0006355
Pste7g00791 1210 Pfam Sin3 family co-repressor 869 962 IPR013194 -
Pste7g00791 1210 SUPERFAMILY PAH2 domain 733 794 IPR036600 GO:0006355
Pste7g00791 1210 ProSiteProfiles PAH domain profile. 382 453 IPR003822 GO:0006355
Pste7g00791 1210 SUPERFAMILY PAH2 domain 7 52 IPR036600 GO:0006355
Pste7g00791 1210 FunFam Paired amphipathic helix protein Sin3 389 451 - -
Pste7g00791 1210 SUPERFAMILY PAH2 domain 236 302 IPR036600 GO:0006355
Pste7g00791 1210 SUPERFAMILY PAH2 domain 383 452 IPR036600 GO:0006355
Pste7g00791 1210 Pfam Paired amphipathic helix repeat 407 450 IPR003822 GO:0006355
Pste7g00791 1210 Pfam Paired amphipathic helix repeat 749 789 IPR003822 GO:0006355
Pste7g00791 1210 Pfam Paired amphipathic helix repeat 492 536 IPR003822 GO:0006355
Pste7g00791 1210 Gene3D Paired amphipathic helix 3 119 IPR036600 GO:0006355
Pste7g00791 1210 MobiDBLite consensus disorder prediction 620 665 - -
Pste7g00791 1210 FunFam Paired amphipathic helix protein SIN3 233 304 - -
Pste7g00791 1210 MobiDBLite consensus disorder prediction 159 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00791 Pste-Chr7 7229515 7246302 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00791 361 488 WRKY Transcription Factor Family AT4G12020 43.750 7.34e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste7g00791 Sin3_corepress 2.3e-27 No_clan